Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC9.19□□□□□ -0.94
PrkdcP97313 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC9.19□□□□□ -0.94
PrkdcP97313 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC9.19□□□□□ -0.94
PrkdcP97313 Gm6447-201ENSMUST00000118905 835 ntBASIC9.19□□□□□ -0.94
PrkdcP97313 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC9.19□□□□□ -0.94
PrkdcP97313 Gm17812-201ENSMUST00000204935 318 ntBASIC9.19□□□□□ -0.94
PrkdcP97313 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC9.19□□□□□ -0.94
PrkdcP97313 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Gm12015-201ENSMUST00000117065 843 ntBASIC9.19□□□□□ -0.94
PrkdcP97313 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC9.19□□□□□ -0.94
PrkdcP97313 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Gm3671-201ENSMUST00000182463 1007 ntBASIC9.19□□□□□ -0.94
PrkdcP97313 Gm37201-201ENSMUST00000191845 523 ntBASIC9.19□□□□□ -0.94
PrkdcP97313 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC9.19□□□□□ -0.94
PrkdcP97313 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
PrkdcP97313 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC9.19□□□□□ -0.94
PrkdcP97313 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC9.19□□□□□ -0.94
PrkdcP97313 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
PrkdcP97313 Camk2g-217ENSMUST00000226630 1937 ntBASIC9.18□□□□□ -0.94
PrkdcP97313 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
PrkdcP97313 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC9.18□□□□□ -0.94
PrkdcP97313 Gm12500-202ENSMUST00000186471 2428 ntBASIC9.18□□□□□ -0.94
PrkdcP97313 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
PrkdcP97313 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
PrkdcP97313 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC9.18□□□□□ -0.94
PrkdcP97313 Gm18730-201ENSMUST00000218038 343 ntBASIC9.18□□□□□ -0.94
PrkdcP97313 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC9.18□□□□□ -0.94
PrkdcP97313 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
PrkdcP97313 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Gm15770-201ENSMUST00000117498 584 ntBASIC9.18□□□□□ -0.94
PrkdcP97313 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Gm25043-201ENSMUST00000158604 212 ntBASIC9.18□□□□□ -0.94
PrkdcP97313 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
PrkdcP97313 Gm8913-201ENSMUST00000209491 641 ntBASIC9.18□□□□□ -0.94
PrkdcP97313 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC9.18□□□□□ -0.94
PrkdcP97313 Gm44616-201ENSMUST00000206417 1732 ntBASIC9.18□□□□□ -0.94
PrkdcP97313 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
PrkdcP97313 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC9.18□□□□□ -0.94
PrkdcP97313 Gm8337-201ENSMUST00000187358 1938 ntBASIC9.18□□□□□ -0.94
PrkdcP97313 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC9.18□□□□□ -0.94
PrkdcP97313 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Gm8492-201ENSMUST00000182375 987 ntBASIC9.18□□□□□ -0.94
PrkdcP97313 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC9.18□□□□□ -0.94
PrkdcP97313 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC9.18□□□□□ -0.94
PrkdcP97313 AC122305.4-201ENSMUST00000216159 1206 ntBASIC9.18□□□□□ -0.94
PrkdcP97313 Gm6722-201ENSMUST00000221586 390 ntBASIC9.18□□□□□ -0.94
PrkdcP97313 AC159103.1-201ENSMUST00000228325 429 ntBASIC9.18□□□□□ -0.94
PrkdcP97313 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PrkdcP97313 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
PrkdcP97313 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
PrkdcP97313 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC9.17□□□□□ -0.94
PrkdcP97313 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PrkdcP97313 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PrkdcP97313 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
PrkdcP97313 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PrkdcP97313 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PrkdcP97313 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PrkdcP97313 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
PrkdcP97313 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
PrkdcP97313 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
PrkdcP97313 Gm24845-201ENSMUST00000158034 109 ntBASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms