Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SgcbP82349 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SgcbP82349 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.37□□□□□ -0.43
SgcbP82349 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC12.37□□□□□ -0.43
SgcbP82349 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcbP82349 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.37□□□□□ -0.43
SgcbP82349 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SgcbP82349 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcbP82349 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SgcbP82349 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcbP82349 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SgcbP82349 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcbP82349 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.37□□□□□ -0.43
SgcbP82349 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.36□□□□□ -0.43
SgcbP82349 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
SgcbP82349 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
SgcbP82349 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SgcbP82349 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SgcbP82349 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.36□□□□□ -0.43
SgcbP82349 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.36□□□□□ -0.43
SgcbP82349 Gm29741-201ENSMUST00000192667 421 ntBASIC12.36□□□□□ -0.43
SgcbP82349 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.36□□□□□ -0.43
SgcbP82349 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.36□□□□□ -0.43
SgcbP82349 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SgcbP82349 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.36□□□□□ -0.43
SgcbP82349 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
SgcbP82349 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SgcbP82349 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
SgcbP82349 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
SgcbP82349 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.36□□□□□ -0.43
SgcbP82349 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SgcbP82349 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SgcbP82349 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SgcbP82349 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SgcbP82349 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.35□□□□□ -0.43
SgcbP82349 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.35□□□□□ -0.43
SgcbP82349 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Gm15321-201ENSMUST00000121290 288 ntBASIC12.35□□□□□ -0.43
SgcbP82349 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.35□□□□□ -0.43
SgcbP82349 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.35□□□□□ -0.43
SgcbP82349 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.35□□□□□ -0.43
SgcbP82349 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.35□□□□□ -0.43
SgcbP82349 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Gm9797-201ENSMUST00000052902 613 ntBASIC12.35□□□□□ -0.43
SgcbP82349 Gm2423-201ENSMUST00000074863 733 ntBASIC12.35□□□□□ -0.43
SgcbP82349 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.35□□□□□ -0.43
SgcbP82349 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.35□□□□□ -0.43
SgcbP82349 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SgcbP82349 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SgcbP82349 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SgcbP82349 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.35□□□□□ -0.43
SgcbP82349 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms