Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CiitaP79621 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CiitaP79621 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CiitaP79621 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CiitaP79621 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CiitaP79621 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CiitaP79621 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CiitaP79621 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CiitaP79621 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CiitaP79621 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CiitaP79621 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
CiitaP79621 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CiitaP79621 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CiitaP79621 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.98□□□□□ -0.01
CiitaP79621 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CiitaP79621 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CiitaP79621 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.98□□□□□ -0.01
CiitaP79621 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
CiitaP79621 Gm9002-201ENSMUST00000178437 499 ntBASIC14.98□□□□□ -0.01
CiitaP79621 Gm8463-201ENSMUST00000208573 613 ntBASIC14.98□□□□□ -0.01
CiitaP79621 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.98□□□□□ -0.01
CiitaP79621 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.98□□□□□ -0.01
CiitaP79621 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CiitaP79621 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CiitaP79621 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CiitaP79621 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CiitaP79621 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CiitaP79621 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.98□□□□□ -0.01
CiitaP79621 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CiitaP79621 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CiitaP79621 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.98□□□□□ -0.01
CiitaP79621 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CiitaP79621 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
CiitaP79621 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CiitaP79621 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CiitaP79621 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CiitaP79621 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CiitaP79621 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CiitaP79621 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CiitaP79621 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CiitaP79621 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CiitaP79621 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CiitaP79621 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CiitaP79621 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CiitaP79621 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CiitaP79621 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CiitaP79621 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CiitaP79621 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CiitaP79621 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CiitaP79621 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.97□□□□□ -0.01
CiitaP79621 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CiitaP79621 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CiitaP79621 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.97□□□□□ -0.01
CiitaP79621 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.97□□□□□ -0.01
CiitaP79621 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CiitaP79621 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CiitaP79621 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CiitaP79621 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CiitaP79621 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CiitaP79621 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CiitaP79621 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.97□□□□□ -0.01
CiitaP79621 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CiitaP79621 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CiitaP79621 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CiitaP79621 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CiitaP79621 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CiitaP79621 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CiitaP79621 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CiitaP79621 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.97□□□□□ -0.01
CiitaP79621 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.97□□□□□ -0.01
CiitaP79621 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CiitaP79621 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CiitaP79621 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CiitaP79621 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CiitaP79621 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CiitaP79621 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CiitaP79621 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CiitaP79621 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CiitaP79621 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.96□□□□□ -0.01
CiitaP79621 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CiitaP79621 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CiitaP79621 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CiitaP79621 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CiitaP79621 Gm5035-201ENSMUST00000215581 927 ntBASIC14.96□□□□□ -0.01
CiitaP79621 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.96□□□□□ -0.01
CiitaP79621 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CiitaP79621 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CiitaP79621 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CiitaP79621 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CiitaP79621 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CiitaP79621 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CiitaP79621 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CiitaP79621 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CiitaP79621 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CiitaP79621 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CiitaP79621 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.02
CiitaP79621 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CiitaP79621 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CiitaP79621 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
CiitaP79621 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms