Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.69□□□□□ -0.22
Shox2P70390 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.69□□□□□ -0.22
Shox2P70390 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.69□□□□□ -0.22
Shox2P70390 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Shox2P70390 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Shox2P70390 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.68□□□□□ -0.22
Shox2P70390 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.68□□□□□ -0.22
Shox2P70390 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Shox2P70390 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 Gm25990-201ENSMUST00000102440 86 ntBASIC13.68□□□□□ -0.22
Shox2P70390 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 Gm15957-201ENSMUST00000118893 974 ntBASIC13.68□□□□□ -0.22
Shox2P70390 Gm23634-201ENSMUST00000175071 91 ntBASIC13.68□□□□□ -0.22
Shox2P70390 Gm10231-201ENSMUST00000181584 441 ntBASIC13.68□□□□□ -0.22
Shox2P70390 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 Gm10175-202ENSMUST00000208752 441 ntBASIC13.68□□□□□ -0.22
Shox2P70390 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.68□□□□□ -0.22
Shox2P70390 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Shox2P70390 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shox2P70390 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.67□□□□□ -0.22
Shox2P70390 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.67□□□□□ -0.22
Shox2P70390 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Shox2P70390 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Shox2P70390 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.67□□□□□ -0.22
Shox2P70390 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Shox2P70390 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.67□□□□□ -0.22
Shox2P70390 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.67□□□□□ -0.22
Shox2P70390 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.67□□□□□ -0.22
Shox2P70390 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.67□□□□□ -0.22
Shox2P70390 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Shox2P70390 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.67□□□□□ -0.22
Shox2P70390 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Shox2P70390 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Shox2P70390 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Shox2P70390 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Shox2P70390 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shox2P70390 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shox2P70390 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms