Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb1P63158 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb1P63158 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb1P63158 Gm24158-201ENSMUST00000175263 71 ntBASIC15.27■□□□□ 0.04
Hmgb1P63158 Gm37714-201ENSMUST00000194742 342 ntBASIC15.27■□□□□ 0.04
Hmgb1P63158 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.27■□□□□ 0.04
Hmgb1P63158 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Hmgb1P63158 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.27■□□□□ 0.04
Hmgb1P63158 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb1P63158 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb1P63158 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb1P63158 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb1P63158 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb1P63158 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb1P63158 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb1P63158 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb1P63158 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb1P63158 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb1P63158 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmgb1P63158 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmgb1P63158 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Hmgb1P63158 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmgb1P63158 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Hmgb1P63158 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb1P63158 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb1P63158 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Hmgb1P63158 Matn2-206ENSMUST00000228570 2798 ntBASIC15.26■□□□□ 0.03
Hmgb1P63158 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb1P63158 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb1P63158 Gm43677-201ENSMUST00000198098 2378 ntBASIC15.26■□□□□ 0.03
Hmgb1P63158 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb1P63158 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Hmgb1P63158 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb1P63158 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb1P63158 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Hmgb1P63158 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Hmgb1P63158 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Hmgb1P63158 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.26■□□□□ 0.03
Hmgb1P63158 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.26■□□□□ 0.03
Hmgb1P63158 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Hmgb1P63158 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.26■□□□□ 0.03
Hmgb1P63158 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb1P63158 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb1P63158 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb1P63158 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb1P63158 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.26■□□□□ 0.03
Hmgb1P63158 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Hmgb1P63158 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb1P63158 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb1P63158 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb1P63158 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb1P63158 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb1P63158 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb1P63158 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb1P63158 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb1P63158 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb1P63158 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.26■□□□□ 0.03
Hmgb1P63158 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb1P63158 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Hmgb1P63158 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb1P63158 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb1P63158 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb1P63158 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb1P63158 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb1P63158 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb1P63158 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.25■□□□□ 0.03
Hmgb1P63158 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb1P63158 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb1P63158 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb1P63158 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb1P63158 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb1P63158 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Hmgb1P63158 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.25■□□□□ 0.03
Hmgb1P63158 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.25■□□□□ 0.03
Hmgb1P63158 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.25■□□□□ 0.03
Hmgb1P63158 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.25■□□□□ 0.03
Hmgb1P63158 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb1P63158 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb1P63158 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Hmgb1P63158 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.25■□□□□ 0.03
Hmgb1P63158 Gm16476-201ENSMUST00000221544 139 ntBASIC15.25■□□□□ 0.03
Hmgb1P63158 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.25■□□□□ 0.03
Hmgb1P63158 Dupd1-202ENSMUST00000224735 548 ntBASIC15.25■□□□□ 0.03
Hmgb1P63158 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb1P63158 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb1P63158 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.25■□□□□ 0.03
Hmgb1P63158 Acot6-202ENSMUST00000222921 3622 ntBASIC15.25■□□□□ 0.03
Hmgb1P63158 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb1P63158 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb1P63158 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb1P63158 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.25■□□□□ 0.03
Hmgb1P63158 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb1P63158 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb1P63158 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Hmgb1P63158 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb1P63158 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb1P63158 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Hmgb1P63158 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb1P63158 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb1P63158 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms