Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Lmo4P61969 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Lmo4P61969 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lmo4P61969 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Lmo4P61969 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.16□□□□□ -0.62
Lmo4P61969 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.16□□□□□ -0.62
Lmo4P61969 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Gm6152-201ENSMUST00000151704 340 ntBASIC11.16□□□□□ -0.62
Lmo4P61969 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.16□□□□□ -0.62
Lmo4P61969 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.16□□□□□ -0.62
Lmo4P61969 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.16□□□□□ -0.62
Lmo4P61969 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.16□□□□□ -0.62
Lmo4P61969 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.16□□□□□ -0.62
Lmo4P61969 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.16□□□□□ -0.62
Lmo4P61969 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.16□□□□□ -0.62
Lmo4P61969 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.16□□□□□ -0.62
Lmo4P61969 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Lmo4P61969 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Lmo4P61969 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.16□□□□□ -0.62
Lmo4P61969 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.16□□□□□ -0.62
Lmo4P61969 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.16□□□□□ -0.62
Lmo4P61969 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.16□□□□□ -0.62
Lmo4P61969 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lmo4P61969 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lmo4P61969 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.15□□□□□ -0.62
Lmo4P61969 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.15□□□□□ -0.62
Lmo4P61969 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lmo4P61969 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lmo4P61969 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Lmo4P61969 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lmo4P61969 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.15□□□□□ -0.62
Lmo4P61969 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lmo4P61969 Gm12957-201ENSMUST00000117835 377 ntBASIC11.15□□□□□ -0.62
Lmo4P61969 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Lmo4P61969 Gm14660-201ENSMUST00000119809 575 ntBASIC11.15□□□□□ -0.62
Lmo4P61969 Mir1938-201ENSMUST00000158746 100 ntBASIC11.15□□□□□ -0.62
Lmo4P61969 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lmo4P61969 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lmo4P61969 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lmo4P61969 Gm27731-201ENSMUST00000185192 107 ntBASIC11.15□□□□□ -0.62
Lmo4P61969 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.15□□□□□ -0.62
Lmo4P61969 Gm38144-201ENSMUST00000192790 465 ntBASIC11.15□□□□□ -0.62
Lmo4P61969 Gm45841-201ENSMUST00000207700 164 ntBASIC11.15□□□□□ -0.62
Lmo4P61969 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Lmo4P61969 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.15□□□□□ -0.62
Lmo4P61969 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.15□□□□□ -0.62
Lmo4P61969 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.15□□□□□ -0.62
Lmo4P61969 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lmo4P61969 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lmo4P61969 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lmo4P61969 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lmo4P61969 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.15□□□□□ -0.62
Lmo4P61969 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Lmo4P61969 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lmo4P61969 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.15□□□□□ -0.62
Lmo4P61969 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lmo4P61969 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lmo4P61969 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Lmo4P61969 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Lmo4P61969 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Lmo4P61969 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Lmo4P61969 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lmo4P61969 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lmo4P61969 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lmo4P61969 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lmo4P61969 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lmo4P61969 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lmo4P61969 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lmo4P61969 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lmo4P61969 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms