Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vbp1P61759 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Vbp1P61759 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.55□□□□□ -0.4
Vbp1P61759 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.55□□□□□ -0.4
Vbp1P61759 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.55□□□□□ -0.4
Vbp1P61759 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vbp1P61759 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vbp1P61759 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vbp1P61759 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vbp1P61759 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.55□□□□□ -0.4
Vbp1P61759 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vbp1P61759 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vbp1P61759 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vbp1P61759 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Vbp1P61759 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vbp1P61759 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vbp1P61759 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vbp1P61759 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vbp1P61759 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Vbp1P61759 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Vbp1P61759 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.55□□□□□ -0.4
Vbp1P61759 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vbp1P61759 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.54□□□□□ -0.4
Vbp1P61759 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.54□□□□□ -0.4
Vbp1P61759 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.54□□□□□ -0.4
Vbp1P61759 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vbp1P61759 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.54□□□□□ -0.4
Vbp1P61759 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.54□□□□□ -0.4
Vbp1P61759 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.54□□□□□ -0.4
Vbp1P61759 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Vbp1P61759 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Vbp1P61759 Gm27742-201ENSMUST00000184667 60 ntBASIC12.54□□□□□ -0.4
Vbp1P61759 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.54□□□□□ -0.4
Vbp1P61759 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.54□□□□□ -0.4
Vbp1P61759 Gm37153-201ENSMUST00000193637 231 ntBASIC12.54□□□□□ -0.4
Vbp1P61759 Gm18246-201ENSMUST00000221023 728 ntBASIC12.54□□□□□ -0.4
Vbp1P61759 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.54□□□□□ -0.4
Vbp1P61759 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Vbp1P61759 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vbp1P61759 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.54□□□□□ -0.4
Vbp1P61759 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.54□□□□□ -0.4
Vbp1P61759 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vbp1P61759 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vbp1P61759 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Vbp1P61759 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Vbp1P61759 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Vbp1P61759 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vbp1P61759 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Vbp1P61759 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Gm15565-201ENSMUST00000118890 427 ntBASIC12.53□□□□□ -0.4
Vbp1P61759 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Vbp1P61759 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.53□□□□□ -0.4
Vbp1P61759 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.53□□□□□ -0.4
Vbp1P61759 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.53□□□□□ -0.4
Vbp1P61759 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Vbp1P61759 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Vbp1P61759 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms