Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a1P61620 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a1P61620 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a1P61620 Gm9726-201ENSMUST00000180321 678 ntBASIC12.24□□□□□ -0.45
Sec61a1P61620 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a1P61620 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.24□□□□□ -0.45
Sec61a1P61620 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sec61a1P61620 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.24□□□□□ -0.45
Sec61a1P61620 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a1P61620 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sec61a1P61620 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a1P61620 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a1P61620 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a1P61620 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sec61a1P61620 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sec61a1P61620 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sec61a1P61620 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a1P61620 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a1P61620 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a1P61620 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a1P61620 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a1P61620 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a1P61620 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a1P61620 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a1P61620 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a1P61620 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sec61a1P61620 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a1P61620 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sec61a1P61620 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a1P61620 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a1P61620 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a1P61620 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.23□□□□□ -0.45
Sec61a1P61620 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Sec61a1P61620 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a1P61620 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.23□□□□□ -0.45
Sec61a1P61620 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.23□□□□□ -0.45
Sec61a1P61620 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a1P61620 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a1P61620 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a1P61620 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61a1P61620 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Sec61a1P61620 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Sec61a1P61620 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a1P61620 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sec61a1P61620 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a1P61620 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.22□□□□□ -0.45
Sec61a1P61620 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.22□□□□□ -0.45
Sec61a1P61620 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.22□□□□□ -0.45
Sec61a1P61620 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sec61a1P61620 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sec61a1P61620 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sec61a1P61620 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sec61a1P61620 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sec61a1P61620 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.22□□□□□ -0.45
Sec61a1P61620 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a1P61620 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a1P61620 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.22□□□□□ -0.45
Sec61a1P61620 Gm25948-201ENSMUST00000175334 112 ntBASIC12.22□□□□□ -0.45
Sec61a1P61620 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.22□□□□□ -0.45
Sec61a1P61620 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.22□□□□□ -0.45
Sec61a1P61620 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a1P61620 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a1P61620 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a1P61620 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.22□□□□□ -0.45
Sec61a1P61620 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a1P61620 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a1P61620 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a1P61620 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a1P61620 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a1P61620 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Sec61a1P61620 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a1P61620 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a1P61620 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a1P61620 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a1P61620 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a1P61620 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61a1P61620 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sec61a1P61620 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sec61a1P61620 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sec61a1P61620 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Sec61a1P61620 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sec61a1P61620 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sec61a1P61620 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.21□□□□□ -0.45
Sec61a1P61620 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Sec61a1P61620 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sec61a1P61620 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sec61a1P61620 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sec61a1P61620 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.21□□□□□ -0.45
Sec61a1P61620 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sec61a1P61620 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.21□□□□□ -0.45
Sec61a1P61620 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.21□□□□□ -0.45
Sec61a1P61620 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.21□□□□□ -0.45
Sec61a1P61620 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.21□□□□□ -0.45
Sec61a1P61620 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.21□□□□□ -0.45
Sec61a1P61620 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sec61a1P61620 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sec61a1P61620 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sec61a1P61620 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.21□□□□□ -0.45
Sec61a1P61620 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sec61a1P61620 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms