Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Sf3b6P59708 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sf3b6P59708 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Sf3b6P59708 Gm15957-201ENSMUST00000118893 974 ntBASIC12.3□□□□□ -0.44
Sf3b6P59708 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.3□□□□□ -0.44
Sf3b6P59708 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sf3b6P59708 Gm5177-201ENSMUST00000183092 997 ntBASIC12.3□□□□□ -0.44
Sf3b6P59708 Gm27920-201ENSMUST00000183953 96 ntBASIC12.3□□□□□ -0.44
Sf3b6P59708 Gm37935-201ENSMUST00000192012 982 ntBASIC12.3□□□□□ -0.44
Sf3b6P59708 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.3□□□□□ -0.44
Sf3b6P59708 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.3□□□□□ -0.44
Sf3b6P59708 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Sf3b6P59708 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.3□□□□□ -0.44
Sf3b6P59708 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Sf3b6P59708 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.3□□□□□ -0.44
Sf3b6P59708 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Sf3b6P59708 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sf3b6P59708 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Sf3b6P59708 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.29□□□□□ -0.44
Sf3b6P59708 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.29□□□□□ -0.44
Sf3b6P59708 Gm11594-201ENSMUST00000122313 162 ntBASIC12.29□□□□□ -0.44
Sf3b6P59708 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sf3b6P59708 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.29□□□□□ -0.44
Sf3b6P59708 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sf3b6P59708 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sf3b6P59708 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Sf3b6P59708 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Sf3b6P59708 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sf3b6P59708 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b6P59708 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.28□□□□□ -0.44
Sf3b6P59708 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.28□□□□□ -0.44
Sf3b6P59708 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Sf3b6P59708 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.28□□□□□ -0.44
Sf3b6P59708 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.28□□□□□ -0.44
Sf3b6P59708 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.28□□□□□ -0.44
Sf3b6P59708 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.28□□□□□ -0.44
Sf3b6P59708 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b6P59708 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms