Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.17□□□□□ -0.14
Tubgcp3P58854 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.17□□□□□ -0.14
Tubgcp3P58854 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Gm37714-201ENSMUST00000194742 342 ntBASIC14.17□□□□□ -0.14
Tubgcp3P58854 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.17□□□□□ -0.14
Tubgcp3P58854 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.17□□□□□ -0.14
Tubgcp3P58854 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubgcp3P58854 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.16□□□□□ -0.14
Tubgcp3P58854 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Gm27533-201ENSMUST00000183800 152 ntBASIC14.16□□□□□ -0.14
Tubgcp3P58854 Gm27430-201ENSMUST00000184585 107 ntBASIC14.16□□□□□ -0.14
Tubgcp3P58854 Gm44333-201ENSMUST00000197168 107 ntBASIC14.16□□□□□ -0.14
Tubgcp3P58854 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubgcp3P58854 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tubgcp3P58854 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.15□□□□□ -0.14
Tubgcp3P58854 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubgcp3P58854 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.15□□□□□ -0.14
Tubgcp3P58854 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubgcp3P58854 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Tubgcp3P58854 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Tubgcp3P58854 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Tubgcp3P58854 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Tubgcp3P58854 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms