Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh11P55288 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh11P55288 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh11P55288 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cdh11P55288 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cdh11P55288 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cdh11P55288 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.66□□□□□ -0.38
Cdh11P55288 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Cdh11P55288 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh11P55288 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.66□□□□□ -0.38
Cdh11P55288 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.66□□□□□ -0.38
Cdh11P55288 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cdh11P55288 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh11P55288 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh11P55288 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh11P55288 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdh11P55288 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cdh11P55288 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.66□□□□□ -0.38
Cdh11P55288 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh11P55288 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh11P55288 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cdh11P55288 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cdh11P55288 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cdh11P55288 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh11P55288 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh11P55288 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh11P55288 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.66□□□□□ -0.38
Cdh11P55288 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cdh11P55288 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Cdh11P55288 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cdh11P55288 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Gm7063-201ENSMUST00000186840 981 ntBASIC12.65□□□□□ -0.38
Cdh11P55288 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdh11P55288 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Cdh11P55288 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cdh11P55288 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cdh11P55288 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Cdh11P55288 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdh11P55288 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Cdh11P55288 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cdh11P55288 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cdh11P55288 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdh11P55288 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.64□□□□□ -0.39
Cdh11P55288 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdh11P55288 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdh11P55288 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Gm8410-201ENSMUST00000117225 605 ntBASIC12.64□□□□□ -0.39
Cdh11P55288 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.64□□□□□ -0.39
Cdh11P55288 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdh11P55288 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdh11P55288 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.64□□□□□ -0.39
Cdh11P55288 Gm27920-201ENSMUST00000183953 96 ntBASIC12.64□□□□□ -0.39
Cdh11P55288 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.64□□□□□ -0.39
Cdh11P55288 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.64□□□□□ -0.39
Cdh11P55288 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms