Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.16□□□□□ -0.14
ClgnP52194 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ClgnP52194 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.16□□□□□ -0.14
ClgnP52194 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.16□□□□□ -0.14
ClgnP52194 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Gm13823-201ENSMUST00000119930 345 ntBASIC14.16□□□□□ -0.14
ClgnP52194 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Gm25144-201ENSMUST00000179561 110 ntBASIC14.16□□□□□ -0.14
ClgnP52194 Gm25352-201ENSMUST00000179815 110 ntBASIC14.16□□□□□ -0.14
ClgnP52194 Gm43575-201ENSMUST00000196420 516 ntBASIC14.16□□□□□ -0.14
ClgnP52194 Gm7774-201ENSMUST00000200064 533 ntBASIC14.16□□□□□ -0.14
ClgnP52194 Gm45453-201ENSMUST00000211758 853 ntBASIC14.16□□□□□ -0.14
ClgnP52194 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ClgnP52194 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ClgnP52194 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ClgnP52194 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.15□□□□□ -0.14
ClgnP52194 BC001981-202ENSMUST00000191393 1545 ntBASIC14.15□□□□□ -0.14
ClgnP52194 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ClgnP52194 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
ClgnP52194 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.15□□□□□ -0.14
ClgnP52194 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ClgnP52194 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.15□□□□□ -0.14
ClgnP52194 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
ClgnP52194 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 Gm27430-201ENSMUST00000184585 107 ntBASIC14.15□□□□□ -0.14
ClgnP52194 Gm44333-201ENSMUST00000197168 107 ntBASIC14.15□□□□□ -0.14
ClgnP52194 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.15□□□□□ -0.14
ClgnP52194 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.15□□□□□ -0.14
ClgnP52194 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ClgnP52194 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.15□□□□□ -0.14
ClgnP52194 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.15□□□□□ -0.14
ClgnP52194 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ClgnP52194 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClgnP52194 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.15□□□□□ -0.14
ClgnP52194 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
ClgnP52194 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
ClgnP52194 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClgnP52194 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.14□□□□□ -0.15
ClgnP52194 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ClgnP52194 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.14□□□□□ -0.15
ClgnP52194 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.14□□□□□ -0.15
ClgnP52194 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClgnP52194 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClgnP52194 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.14□□□□□ -0.15
ClgnP52194 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClgnP52194 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClgnP52194 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClgnP52194 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClgnP52194 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.14□□□□□ -0.15
ClgnP52194 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClgnP52194 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.14□□□□□ -0.15
ClgnP52194 Gm18766-201ENSMUST00000189811 808 ntBASIC14.14□□□□□ -0.15
ClgnP52194 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.14□□□□□ -0.15
ClgnP52194 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ClgnP52194 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms