Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Brca1P48754 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brca1P48754 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Brca1P48754 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brca1P48754 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brca1P48754 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brca1P48754 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brca1P48754 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brca1P48754 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brca1P48754 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brca1P48754 Gm4909-201ENSMUST00000118749 794 ntBASIC15.26■□□□□ 0.03
Brca1P48754 Gm12217-201ENSMUST00000118858 696 ntBASIC15.26■□□□□ 0.03
Brca1P48754 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brca1P48754 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Brca1P48754 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.26■□□□□ 0.03
Brca1P48754 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brca1P48754 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Brca1P48754 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.26■□□□□ 0.03
Brca1P48754 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brca1P48754 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Brca1P48754 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Brca1P48754 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Brca1P48754 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Brca1P48754 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.26■□□□□ 0.03
Brca1P48754 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Brca1P48754 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Brca1P48754 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Brca1P48754 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Brca1P48754 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Brca1P48754 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Brca1P48754 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Brca1P48754 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Brca1P48754 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.25■□□□□ 0.03
Brca1P48754 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Brca1P48754 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Brca1P48754 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC15.25■□□□□ 0.03
Brca1P48754 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Brca1P48754 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Brca1P48754 Gm14130-201ENSMUST00000118417 987 ntBASIC15.25■□□□□ 0.03
Brca1P48754 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Brca1P48754 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.25■□□□□ 0.03
Brca1P48754 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.25■□□□□ 0.03
Brca1P48754 Mir7032-201ENSMUST00000185154 79 ntBASIC15.25■□□□□ 0.03
Brca1P48754 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.25■□□□□ 0.03
Brca1P48754 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Brca1P48754 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Brca1P48754 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Brca1P48754 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Brca1P48754 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Brca1P48754 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Brca1P48754 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Brca1P48754 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Brca1P48754 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Brca1P48754 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Brca1P48754 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.25■□□□□ 0.03
Brca1P48754 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Brca1P48754 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Brca1P48754 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Brca1P48754 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Brca1P48754 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Brca1P48754 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Brca1P48754 Mospd4-201ENSMUST00000180618 576 ntBASIC15.24■□□□□ 0.03
Brca1P48754 Gm8959-201ENSMUST00000213150 571 ntBASIC15.24■□□□□ 0.03
Brca1P48754 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.24■□□□□ 0.03
Brca1P48754 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Brca1P48754 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Brca1P48754 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Brca1P48754 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Brca1P48754 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Brca1P48754 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Brca1P48754 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Brca1P48754 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Brca1P48754 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Brca1P48754 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Brca1P48754 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Brca1P48754 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.24■□□□□ 0.03
Brca1P48754 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Brca1P48754 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Brca1P48754 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Brca1P48754 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Brca1P48754 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Brca1P48754 Gm12201-201ENSMUST00000120657 1234 ntBASIC15.24■□□□□ 0.03
Brca1P48754 Gm14017-201ENSMUST00000121934 386 ntBASIC15.24■□□□□ 0.03
Brca1P48754 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Brca1P48754 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Brca1P48754 Gm4768-201ENSMUST00000206199 686 ntBASIC15.24■□□□□ 0.03
Brca1P48754 CT009718.3-201ENSMUST00000221116 367 ntBASIC15.24■□□□□ 0.03
Brca1P48754 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Brca1P48754 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Brca1P48754 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Brca1P48754 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Brca1P48754 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Brca1P48754 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Brca1P48754 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Brca1P48754 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Brca1P48754 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Brca1P48754 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Brca1P48754 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Brca1P48754 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Brca1P48754 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms