Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.07□□□□□ -0.16
Vps4bP46467 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Vps4bP46467 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Vps4bP46467 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.06□□□□□ -0.16
Vps4bP46467 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vps4bP46467 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.06□□□□□ -0.16
Vps4bP46467 Gm29741-201ENSMUST00000192667 421 ntBASIC14.06□□□□□ -0.16
Vps4bP46467 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.06□□□□□ -0.16
Vps4bP46467 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vps4bP46467 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Vps4bP46467 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Vps4bP46467 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.06□□□□□ -0.16
Vps4bP46467 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Vps4bP46467 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.06□□□□□ -0.16
Vps4bP46467 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps4bP46467 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.05□□□□□ -0.16
Vps4bP46467 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Vps4bP46467 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4bP46467 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.05□□□□□ -0.16
Vps4bP46467 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Vps4bP46467 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.05□□□□□ -0.16
Vps4bP46467 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Vps4bP46467 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4bP46467 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4bP46467 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Vps4bP46467 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4bP46467 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.05□□□□□ -0.16
Vps4bP46467 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4bP46467 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.05□□□□□ -0.16
Vps4bP46467 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4bP46467 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.05□□□□□ -0.16
Vps4bP46467 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4bP46467 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4bP46467 Gm20949-201ENSMUST00000206478 952 ntBASIC14.05□□□□□ -0.16
Vps4bP46467 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4bP46467 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Vps4bP46467 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Vps4bP46467 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4bP46467 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4bP46467 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4bP46467 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4bP46467 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4bP46467 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps4bP46467 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vps4bP46467 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Vps4bP46467 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vps4bP46467 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vps4bP46467 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Vps4bP46467 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.04□□□□□ -0.16
Vps4bP46467 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Vps4bP46467 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.04□□□□□ -0.16
Vps4bP46467 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.04□□□□□ -0.16
Vps4bP46467 Gm18766-201ENSMUST00000189811 808 ntBASIC14.04□□□□□ -0.16
Vps4bP46467 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.04□□□□□ -0.16
Vps4bP46467 Gm5312-201ENSMUST00000203728 547 ntBASIC14.04□□□□□ -0.16
Vps4bP46467 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.04□□□□□ -0.16
Vps4bP46467 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.04□□□□□ -0.16
Vps4bP46467 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vps4bP46467 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms