Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.39□□□□□ -0.27
Tnfsf4P43488 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfsf4P43488 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Tnfsf4P43488 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.38□□□□□ -0.27
Tnfsf4P43488 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.38□□□□□ -0.27
Tnfsf4P43488 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.38□□□□□ -0.27
Tnfsf4P43488 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.38□□□□□ -0.27
Tnfsf4P43488 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.38□□□□□ -0.27
Tnfsf4P43488 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfsf4P43488 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.37□□□□□ -0.27
Tnfsf4P43488 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Gm18889-201ENSMUST00000174284 929 ntBASIC13.37□□□□□ -0.27
Tnfsf4P43488 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Gm27494-201ENSMUST00000184735 189 ntBASIC13.37□□□□□ -0.27
Tnfsf4P43488 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Gm29741-201ENSMUST00000192667 421 ntBASIC13.37□□□□□ -0.27
Tnfsf4P43488 Gm18027-201ENSMUST00000218947 619 ntBASIC13.37□□□□□ -0.27
Tnfsf4P43488 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.37□□□□□ -0.27
Tnfsf4P43488 Mir125a-201ENSMUST00000083545 68 ntBASIC13.37□□□□□ -0.27
Tnfsf4P43488 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.37□□□□□ -0.27
Tnfsf4P43488 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tnfsf4P43488 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms