Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.11□□□□□ -0.63
Cd27P41272 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd27P41272 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd27P41272 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd27P41272 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd27P41272 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Cd27P41272 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.11□□□□□ -0.63
Cd27P41272 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd27P41272 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd27P41272 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd27P41272 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd27P41272 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd27P41272 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Cd27P41272 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cd27P41272 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Mir698-201ENSMUST00000102164 109 ntBASIC11.1□□□□□ -0.63
Cd27P41272 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.1□□□□□ -0.63
Cd27P41272 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cd27P41272 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Gm42612-201ENSMUST00000197986 623 ntBASIC11.1□□□□□ -0.63
Cd27P41272 Gm43170-201ENSMUST00000199827 612 ntBASIC11.1□□□□□ -0.63
Cd27P41272 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.1□□□□□ -0.63
Cd27P41272 Gm44855-201ENSMUST00000205725 362 ntBASIC11.1□□□□□ -0.63
Cd27P41272 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cd27P41272 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Gm6218-201ENSMUST00000219812 628 ntBASIC11.1□□□□□ -0.63
Cd27P41272 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Gm9797-201ENSMUST00000052902 613 ntBASIC11.1□□□□□ -0.63
Cd27P41272 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.1□□□□□ -0.63
Cd27P41272 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.1□□□□□ -0.63
Cd27P41272 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cd27P41272 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.1□□□□□ -0.63
Cd27P41272 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cd27P41272 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd27P41272 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cd27P41272 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.09□□□□□ -0.63
Cd27P41272 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.09□□□□□ -0.63
Cd27P41272 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.09□□□□□ -0.63
Cd27P41272 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cd27P41272 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Cd27P41272 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cd27P41272 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cd27P41272 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.09□□□□□ -0.63
Cd27P41272 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.09□□□□□ -0.63
Cd27P41272 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cd27P41272 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.09□□□□□ -0.63
Cd27P41272 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Cd27P41272 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd27P41272 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms