Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TfamP40630 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.44□□□□□ -0.26
TfamP40630 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TfamP40630 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TfamP40630 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.44□□□□□ -0.26
TfamP40630 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TfamP40630 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TfamP40630 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TfamP40630 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TfamP40630 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TfamP40630 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TfamP40630 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TfamP40630 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TfamP40630 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TfamP40630 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.43□□□□□ -0.26
TfamP40630 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TfamP40630 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
TfamP40630 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TfamP40630 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TfamP40630 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TfamP40630 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TfamP40630 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TfamP40630 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TfamP40630 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
TfamP40630 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TfamP40630 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TfamP40630 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
TfamP40630 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.43□□□□□ -0.26
TfamP40630 Gm44335-201ENSMUST00000196879 141 ntBASIC13.43□□□□□ -0.26
TfamP40630 Gm44297-201ENSMUST00000198304 141 ntBASIC13.43□□□□□ -0.26
TfamP40630 Gm44346-201ENSMUST00000198851 141 ntBASIC13.43□□□□□ -0.26
TfamP40630 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TfamP40630 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TfamP40630 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TfamP40630 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TfamP40630 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
TfamP40630 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TfamP40630 Mir125a-201ENSMUST00000083545 68 ntBASIC13.43□□□□□ -0.26
TfamP40630 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TfamP40630 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TfamP40630 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TfamP40630 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.43□□□□□ -0.26
TfamP40630 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TfamP40630 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
TfamP40630 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TfamP40630 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TfamP40630 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TfamP40630 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
TfamP40630 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
TfamP40630 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TfamP40630 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
TfamP40630 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TfamP40630 Gm11594-201ENSMUST00000122313 162 ntBASIC13.42□□□□□ -0.26
TfamP40630 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.42□□□□□ -0.26
TfamP40630 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.42□□□□□ -0.26
TfamP40630 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.42□□□□□ -0.26
TfamP40630 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.42□□□□□ -0.26
TfamP40630 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.42□□□□□ -0.26
TfamP40630 Gm18766-201ENSMUST00000189811 808 ntBASIC13.42□□□□□ -0.26
TfamP40630 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.42□□□□□ -0.26
TfamP40630 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.42□□□□□ -0.26
TfamP40630 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TfamP40630 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TfamP40630 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TfamP40630 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TfamP40630 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TfamP40630 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TfamP40630 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TfamP40630 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TfamP40630 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TfamP40630 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.41□□□□□ -0.26
TfamP40630 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TfamP40630 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
TfamP40630 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TfamP40630 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TfamP40630 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TfamP40630 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms