Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.17□□□□□ -0.14
Cxcl12P40224 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cxcl12P40224 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cxcl12P40224 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cxcl12P40224 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.17□□□□□ -0.14
Cxcl12P40224 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Cxcl12P40224 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.17□□□□□ -0.14
Cxcl12P40224 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cxcl12P40224 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl12P40224 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.16□□□□□ -0.14
Cxcl12P40224 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.16□□□□□ -0.14
Cxcl12P40224 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.16□□□□□ -0.14
Cxcl12P40224 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 Gm15770-201ENSMUST00000117498 584 ntBASIC14.16□□□□□ -0.14
Cxcl12P40224 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.16□□□□□ -0.14
Cxcl12P40224 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.16□□□□□ -0.14
Cxcl12P40224 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.16□□□□□ -0.14
Cxcl12P40224 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.16□□□□□ -0.14
Cxcl12P40224 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.16□□□□□ -0.14
Cxcl12P40224 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.16□□□□□ -0.14
Cxcl12P40224 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.16□□□□□ -0.14
Cxcl12P40224 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.16□□□□□ -0.14
Cxcl12P40224 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.16□□□□□ -0.14
Cxcl12P40224 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cxcl12P40224 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl12P40224 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.15□□□□□ -0.14
Cxcl12P40224 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.15□□□□□ -0.14
Cxcl12P40224 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cxcl12P40224 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.15□□□□□ -0.14
Cxcl12P40224 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.15□□□□□ -0.14
Cxcl12P40224 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.15□□□□□ -0.14
Cxcl12P40224 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cxcl12P40224 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Cxcl12P40224 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cxcl12P40224 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cxcl12P40224 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cxcl12P40224 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.15□□□□□ -0.14
Cxcl12P40224 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms