Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.78□□□□□ -0.36
Nedd8P29595 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.78□□□□□ -0.36
Nedd8P29595 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd8P29595 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nedd8P29595 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.78□□□□□ -0.36
Nedd8P29595 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nedd8P29595 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nedd8P29595 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nedd8P29595 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Nedd8P29595 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nedd8P29595 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nedd8P29595 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nedd8P29595 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nedd8P29595 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nedd8P29595 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nedd8P29595 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd8P29595 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd8P29595 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.77□□□□□ -0.37
Nedd8P29595 Gm7977-201ENSMUST00000193787 748 ntBASIC12.77□□□□□ -0.37
Nedd8P29595 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Nedd8P29595 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd8P29595 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd8P29595 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd8P29595 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.77□□□□□ -0.37
Nedd8P29595 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Nedd8P29595 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.77□□□□□ -0.37
Nedd8P29595 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd8P29595 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd8P29595 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd8P29595 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.77□□□□□ -0.37
Nedd8P29595 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd8P29595 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd8P29595 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Nedd8P29595 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd8P29595 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd8P29595 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd8P29595 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nedd8P29595 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nedd8P29595 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.76□□□□□ -0.37
Nedd8P29595 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.76□□□□□ -0.37
Nedd8P29595 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nedd8P29595 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Nedd8P29595 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.76□□□□□ -0.37
Nedd8P29595 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.76□□□□□ -0.37
Nedd8P29595 Gm37153-201ENSMUST00000193637 231 ntBASIC12.76□□□□□ -0.37
Nedd8P29595 Gm37230-201ENSMUST00000194491 818 ntBASIC12.76□□□□□ -0.37
Nedd8P29595 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.76□□□□□ -0.37
Nedd8P29595 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.76□□□□□ -0.37
Nedd8P29595 Gm18246-201ENSMUST00000221023 728 ntBASIC12.76□□□□□ -0.37
Nedd8P29595 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.76□□□□□ -0.37
Nedd8P29595 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.76□□□□□ -0.37
Nedd8P29595 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.76□□□□□ -0.37
Nedd8P29595 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.76□□□□□ -0.37
Nedd8P29595 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nedd8P29595 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.76□□□□□ -0.37
Nedd8P29595 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd8P29595 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nedd8P29595 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Nedd8P29595 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nedd8P29595 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Nedd8P29595 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Nedd8P29595 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nedd8P29595 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.75□□□□□ -0.37
Nedd8P29595 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nedd8P29595 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.75□□□□□ -0.37
Nedd8P29595 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms