Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BgnP28653 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BgnP28653 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.84□□□□□ -0.35
BgnP28653 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
BgnP28653 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.84□□□□□ -0.35
BgnP28653 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.84□□□□□ -0.35
BgnP28653 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.84□□□□□ -0.35
BgnP28653 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BgnP28653 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
BgnP28653 Gm7230-201ENSMUST00000173026 815 ntBASIC12.84□□□□□ -0.35
BgnP28653 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.84□□□□□ -0.35
BgnP28653 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.84□□□□□ -0.35
BgnP28653 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.84□□□□□ -0.35
BgnP28653 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BgnP28653 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
BgnP28653 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BgnP28653 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BgnP28653 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BgnP28653 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
BgnP28653 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BgnP28653 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BgnP28653 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BgnP28653 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BgnP28653 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BgnP28653 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
BgnP28653 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
BgnP28653 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
BgnP28653 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
BgnP28653 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
BgnP28653 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
BgnP28653 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.83□□□□□ -0.36
BgnP28653 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
BgnP28653 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.83□□□□□ -0.36
BgnP28653 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
BgnP28653 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
BgnP28653 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
BgnP28653 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.83□□□□□ -0.36
BgnP28653 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.83□□□□□ -0.36
BgnP28653 Gm2272-201ENSMUST00000194903 582 ntBASIC12.83□□□□□ -0.36
BgnP28653 Gm6376-201ENSMUST00000209407 580 ntBASIC12.83□□□□□ -0.36
BgnP28653 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.83□□□□□ -0.36
BgnP28653 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
BgnP28653 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.83□□□□□ -0.36
BgnP28653 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
BgnP28653 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.83□□□□□ -0.36
BgnP28653 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
BgnP28653 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
BgnP28653 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BgnP28653 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
BgnP28653 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.82□□□□□ -0.36
BgnP28653 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.82□□□□□ -0.36
BgnP28653 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.82□□□□□ -0.36
BgnP28653 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
BgnP28653 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
BgnP28653 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BgnP28653 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms