Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf1aP25118 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf1aP25118 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Gm5566-201ENSMUST00000116118 459 ntBASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Gm18766-201ENSMUST00000189811 808 ntBASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Gm10253-201ENSMUST00000194270 940 ntBASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf1aP25118 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms