Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccl3P10855 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.18□□□□□ -0.46
Ccl3P10855 Gm4271-201ENSMUST00000174444 973 ntBASIC12.18□□□□□ -0.46
Ccl3P10855 Gm27682-201ENSMUST00000183930 110 ntBASIC12.18□□□□□ -0.46
Ccl3P10855 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Ccl3P10855 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.18□□□□□ -0.46
Ccl3P10855 Gm17330-201ENSMUST00000221047 165 ntBASIC12.18□□□□□ -0.46
Ccl3P10855 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.18□□□□□ -0.46
Ccl3P10855 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.18□□□□□ -0.46
Ccl3P10855 Gm26315-201ENSMUST00000083890 321 ntBASIC12.18□□□□□ -0.46
Ccl3P10855 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccl3P10855 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Ccl3P10855 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Ccl3P10855 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.18□□□□□ -0.46
Ccl3P10855 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccl3P10855 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.17□□□□□ -0.46
Ccl3P10855 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccl3P10855 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.17□□□□□ -0.46
Ccl3P10855 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ccl3P10855 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccl3P10855 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Gm38144-201ENSMUST00000192790 465 ntBASIC12.17□□□□□ -0.46
Ccl3P10855 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccl3P10855 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.17□□□□□ -0.46
Ccl3P10855 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccl3P10855 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.17□□□□□ -0.46
Ccl3P10855 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.17□□□□□ -0.46
Ccl3P10855 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccl3P10855 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ccl3P10855 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccl3P10855 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ccl3P10855 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccl3P10855 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccl3P10855 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Ccl3P10855 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccl3P10855 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ccl3P10855 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.16□□□□□ -0.46
Ccl3P10855 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl3P10855 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccl3P10855 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccl3P10855 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccl3P10855 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccl3P10855 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl3P10855 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl3P10855 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccl3P10855 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.16□□□□□ -0.46
Ccl3P10855 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccl3P10855 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccl3P10855 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms