Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl1P10146 Gm5763-201ENSMUST00000155951 1530 ntBASIC10.74□□□□□ -0.69
Ccl1P10146 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl1P10146 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl1P10146 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl1P10146 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.73□□□□□ -0.69
Ccl1P10146 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC10.73□□□□□ -0.69
Ccl1P10146 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl1P10146 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Ccl1P10146 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Ccl1P10146 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl1P10146 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC10.73□□□□□ -0.69
Ccl1P10146 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC10.73□□□□□ -0.69
Ccl1P10146 Gm45167-201ENSMUST00000208007 322 ntBASIC10.73□□□□□ -0.69
Ccl1P10146 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl1P10146 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl1P10146 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Ccl1P10146 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl1P10146 Spr-ps1-201ENSMUST00000089584 605 ntBASIC10.73□□□□□ -0.69
Ccl1P10146 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl1P10146 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl1P10146 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl1P10146 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl1P10146 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Ccl1P10146 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Ccl1P10146 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Ccl1P10146 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl1P10146 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl1P10146 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl1P10146 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl1P10146 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Ccl1P10146 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Ccl1P10146 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl1P10146 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl1P10146 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Ccl1P10146 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Ccl1P10146 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.72□□□□□ -0.69
Ccl1P10146 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.72□□□□□ -0.69
Ccl1P10146 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Ccl1P10146 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ccl1P10146 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ccl1P10146 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ccl1P10146 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Ccl1P10146 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Ccl1P10146 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Ccl1P10146 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC10.72□□□□□ -0.69
Ccl1P10146 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC10.72□□□□□ -0.69
Ccl1P10146 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ccl1P10146 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ccl1P10146 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC10.72□□□□□ -0.69
Ccl1P10146 Gm43935-201ENSMUST00000203569 1050 ntBASIC10.72□□□□□ -0.69
Ccl1P10146 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC10.72□□□□□ -0.69
Ccl1P10146 Gm45098-201ENSMUST00000207179 657 ntBASIC10.72□□□□□ -0.69
Ccl1P10146 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 AC119177.1-201ENSMUST00000227647 1332 ntBASIC10.72□□□□□ -0.69
Ccl1P10146 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Ccl1P10146 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Ccl1P10146 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC10.72□□□□□ -0.69
Ccl1P10146 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC10.72□□□□□ -0.69
Ccl1P10146 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl1P10146 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccl1P10146 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Ccl1P10146 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Ccl1P10146 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccl1P10146 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Ccl1P10146 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms