Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ly6c1P0CW02 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Gm18719-201ENSMUST00000196696 1413 ntBASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Gm13385-201ENSMUST00000121089 220 ntBASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Gm17795-201ENSMUST00000214505 757 ntBASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.62□□□□□ -0.55
Ly6c1P0CW02 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Gm12859-201ENSMUST00000117834 427 ntBASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Gm38188-201ENSMUST00000192879 856 ntBASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.61□□□□□ -0.55
Ly6c1P0CW02 AC125539.1-202ENSMUST00000226449 670 ntBASIC11.61□□□□□ -0.55
Ly6c1P0CW02 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ly6c1P0CW02 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms