Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.05□□□□□ -0.48
PtcraP0C6B2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.05□□□□□ -0.48
PtcraP0C6B2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Gm27989-201ENSMUST00000184721 107 ntBASIC12.05□□□□□ -0.48
PtcraP0C6B2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.05□□□□□ -0.48
PtcraP0C6B2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
PtcraP0C6B2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.05□□□□□ -0.48
PtcraP0C6B2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.05□□□□□ -0.48
PtcraP0C6B2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
PtcraP0C6B2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.04□□□□□ -0.48
PtcraP0C6B2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Gm11434-201ENSMUST00000122379 629 ntBASIC12.04□□□□□ -0.48
PtcraP0C6B2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Gm27772-201ENSMUST00000184900 187 ntBASIC12.04□□□□□ -0.48
PtcraP0C6B2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Gm18905-201ENSMUST00000205454 928 ntBASIC12.04□□□□□ -0.48
PtcraP0C6B2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PtcraP0C6B2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
PtcraP0C6B2 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.03□□□□□ -0.48
PtcraP0C6B2 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms