Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
Rc3h2P0C090 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h2P0C090 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h2P0C090 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h2P0C090 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h2P0C090 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.1□□□□□ -0.15
Rc3h2P0C090 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h2P0C090 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h2P0C090 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h2P0C090 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h2P0C090 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h2P0C090 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rc3h2P0C090 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.09□□□□□ -0.15
Rc3h2P0C090 Gm18062-201ENSMUST00000208020 547 ntBASIC14.09□□□□□ -0.15
Rc3h2P0C090 Gm18055-201ENSMUST00000208254 547 ntBASIC14.09□□□□□ -0.15
Rc3h2P0C090 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.09□□□□□ -0.15
Rc3h2P0C090 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rc3h2P0C090 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rc3h2P0C090 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rc3h2P0C090 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rc3h2P0C090 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rc3h2P0C090 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rc3h2P0C090 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rc3h2P0C090 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rc3h2P0C090 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rc3h2P0C090 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rc3h2P0C090 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rc3h2P0C090 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rc3h2P0C090 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Rc3h2P0C090 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rc3h2P0C090 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rc3h2P0C090 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.08□□□□□ -0.15
Rc3h2P0C090 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h2P0C090 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h2P0C090 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h2P0C090 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Rc3h2P0C090 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h2P0C090 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h2P0C090 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h2P0C090 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h2P0C090 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.08□□□□□ -0.16
Rc3h2P0C090 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.08□□□□□ -0.16
Rc3h2P0C090 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.08□□□□□ -0.16
Rc3h2P0C090 Gm15429-201ENSMUST00000151268 798 ntBASIC14.08□□□□□ -0.16
Rc3h2P0C090 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.08□□□□□ -0.16
Rc3h2P0C090 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h2P0C090 Gm17794-201ENSMUST00000220252 955 ntBASIC14.08□□□□□ -0.16
Rc3h2P0C090 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.08□□□□□ -0.16
Rc3h2P0C090 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h2P0C090 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h2P0C090 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rc3h2P0C090 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h2P0C090 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h2P0C090 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h2P0C090 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.08□□□□□ -0.16
Rc3h2P0C090 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h2P0C090 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h2P0C090 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h2P0C090 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Rc3h2P0C090 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h2P0C090 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Rc3h2P0C090 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.08□□□□□ -0.16
Rc3h2P0C090 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h2P0C090 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rc3h2P0C090 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h2P0C090 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h2P0C090 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rc3h2P0C090 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rc3h2P0C090 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rc3h2P0C090 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.07□□□□□ -0.16
Rc3h2P0C090 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms