Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a2P08122 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a2P08122 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC12.66□□□□□ -0.38
Col4a2P08122 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a2P08122 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.66□□□□□ -0.38
Col4a2P08122 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Col4a2P08122 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Gm13369-201ENSMUST00000119442 987 ntBASIC12.65□□□□□ -0.38
Col4a2P08122 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Col4a2P08122 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.65□□□□□ -0.38
Col4a2P08122 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Col4a2P08122 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.65□□□□□ -0.38
Col4a2P08122 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.65□□□□□ -0.38
Col4a2P08122 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Col4a2P08122 Gm45865-201ENSMUST00000211815 945 ntBASIC12.65□□□□□ -0.38
Col4a2P08122 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.65□□□□□ -0.38
Col4a2P08122 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.65□□□□□ -0.38
Col4a2P08122 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.65□□□□□ -0.38
Col4a2P08122 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC12.65□□□□□ -0.38
Col4a2P08122 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Col4a2P08122 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Col4a2P08122 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Col4a2P08122 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.65□□□□□ -0.38
Col4a2P08122 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Col4a2P08122 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
Col4a2P08122 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Gm2991-201ENSMUST00000173338 480 ntBASIC12.65□□□□□ -0.38
Col4a2P08122 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.65□□□□□ -0.38
Col4a2P08122 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a2P08122 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col4a2P08122 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col4a2P08122 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col4a2P08122 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Col4a2P08122 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col4a2P08122 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.65□□□□□ -0.39
Col4a2P08122 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.65□□□□□ -0.39
Col4a2P08122 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.64□□□□□ -0.39
Col4a2P08122 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Col4a2P08122 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Gm16479-201ENSMUST00000121706 932 ntBASIC12.64□□□□□ -0.39
Col4a2P08122 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.64□□□□□ -0.39
Col4a2P08122 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Mir7070-201ENSMUST00000183657 86 ntBASIC12.64□□□□□ -0.39
Col4a2P08122 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Gm3786-201ENSMUST00000202659 378 ntBASIC12.64□□□□□ -0.39
Col4a2P08122 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Gm10268-201ENSMUST00000085340 555 ntBASIC12.64□□□□□ -0.39
Col4a2P08122 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Col4a2P08122 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.64□□□□□ -0.39
Col4a2P08122 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.64□□□□□ -0.39
Col4a2P08122 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Col4a2P08122 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a2P08122 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Col4a2P08122 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.64□□□□□ -0.39
Col4a2P08122 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.64□□□□□ -0.39
Col4a2P08122 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Col4a2P08122 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a2P08122 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a2P08122 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms