Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PrnpP04925 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PrnpP04925 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PrnpP04925 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PrnpP04925 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PrnpP04925 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PrnpP04925 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PrnpP04925 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.29□□□□□ -0.12
PrnpP04925 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PrnpP04925 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PrnpP04925 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PrnpP04925 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PrnpP04925 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PrnpP04925 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PrnpP04925 Gm12203-201ENSMUST00000118235 598 ntBASIC14.29□□□□□ -0.12
PrnpP04925 Gm12209-201ENSMUST00000120089 596 ntBASIC14.29□□□□□ -0.12
PrnpP04925 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PrnpP04925 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PrnpP04925 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.29□□□□□ -0.12
PrnpP04925 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.29□□□□□ -0.12
PrnpP04925 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PrnpP04925 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.29□□□□□ -0.12
PrnpP04925 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.29□□□□□ -0.12
PrnpP04925 Gm26315-201ENSMUST00000083890 321 ntBASIC14.29□□□□□ -0.12
PrnpP04925 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PrnpP04925 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
PrnpP04925 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PrnpP04925 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PrnpP04925 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.29□□□□□ -0.12
PrnpP04925 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PrnpP04925 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PrnpP04925 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PrnpP04925 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PrnpP04925 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PrnpP04925 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PrnpP04925 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PrnpP04925 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PrnpP04925 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.28□□□□□ -0.12
PrnpP04925 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.28□□□□□ -0.12
PrnpP04925 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.28□□□□□ -0.12
PrnpP04925 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.28□□□□□ -0.12
PrnpP04925 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.28□□□□□ -0.12
PrnpP04925 Gm4271-201ENSMUST00000174444 973 ntBASIC14.28□□□□□ -0.12
PrnpP04925 Gm2445-201ENSMUST00000182798 989 ntBASIC14.28□□□□□ -0.12
PrnpP04925 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.28□□□□□ -0.12
PrnpP04925 Gm29608-201ENSMUST00000190444 463 ntBASIC14.28□□□□□ -0.12
PrnpP04925 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.28□□□□□ -0.12
PrnpP04925 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.28□□□□□ -0.12
PrnpP04925 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.28□□□□□ -0.12
PrnpP04925 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.28□□□□□ -0.12
PrnpP04925 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PrnpP04925 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PrnpP04925 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
PrnpP04925 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PrnpP04925 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PrnpP04925 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PrnpP04925 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PrnpP04925 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.27□□□□□ -0.12
PrnpP04925 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PrnpP04925 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PrnpP04925 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PrnpP04925 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PrnpP04925 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PrnpP04925 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PrnpP04925 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PrnpP04925 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PrnpP04925 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.27□□□□□ -0.12
PrnpP04925 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PrnpP04925 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PrnpP04925 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PrnpP04925 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PrnpP04925 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PrnpP04925 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PrnpP04925 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PrnpP04925 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PrnpP04925 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.27□□□□□ -0.13
PrnpP04925 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PrnpP04925 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.27□□□□□ -0.13
PrnpP04925 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PrnpP04925 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
PrnpP04925 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PrnpP04925 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PrnpP04925 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
PrnpP04925 Gm18054-201ENSMUST00000207539 555 ntBASIC14.27□□□□□ -0.13
PrnpP04925 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.27□□□□□ -0.13
PrnpP04925 Gm45880-201ENSMUST00000213041 853 ntBASIC14.27□□□□□ -0.13
PrnpP04925 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PrnpP04925 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PrnpP04925 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PrnpP04925 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PrnpP04925 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PrnpP04925 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PrnpP04925 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
PrnpP04925 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PrnpP04925 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
PrnpP04925 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PrnpP04925 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PrnpP04925 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PrnpP04925 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PrnpP04925 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms