Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.17□□□□□ -0.46
P04224 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
P04224 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
P04224 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.16□□□□□ -0.46
P04224 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
P04224 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
P04224 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.16□□□□□ -0.46
P04224 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.16□□□□□ -0.46
P04224 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
P04224 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.16□□□□□ -0.46
P04224 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.16□□□□□ -0.46
P04224 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Gm21362-201ENSMUST00000194272 928 ntBASIC12.16□□□□□ -0.46
P04224 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.16□□□□□ -0.46
P04224 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.16□□□□□ -0.46
P04224 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.16□□□□□ -0.46
P04224 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.16□□□□□ -0.46
P04224 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
P04224 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.16□□□□□ -0.46
P04224 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
P04224 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
P04224 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P04224 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
P04224 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.15□□□□□ -0.46
P04224 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P04224 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
P04224 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P04224 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04224 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04224 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04224 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.15□□□□□ -0.46
P04224 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04224 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.15□□□□□ -0.46
P04224 Gm9103-201ENSMUST00000119371 405 ntBASIC12.15□□□□□ -0.46
P04224 Gm13464-201ENSMUST00000119418 935 ntBASIC12.15□□□□□ -0.46
P04224 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.15□□□□□ -0.46
P04224 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.15□□□□□ -0.46
P04224 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
P04224 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
P04224 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.15□□□□□ -0.46
P04224 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.15□□□□□ -0.46
P04224 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
P04224 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.15□□□□□ -0.46
P04224 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.15□□□□□ -0.46
P04224 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.15□□□□□ -0.46
P04224 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
P04224 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04224 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04224 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
P04224 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04224 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04224 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04224 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P04224 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
P04224 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms