Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P04213 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P04213 Gm15460-201ENSMUST00000118147 391 ntBASIC13.3□□□□□ -0.28
P04213 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04213 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.3□□□□□ -0.28
P04213 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.3□□□□□ -0.28
P04213 Gm27618-201ENSMUST00000183671 60 ntBASIC13.3□□□□□ -0.28
P04213 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.3□□□□□ -0.28
P04213 Gm37935-201ENSMUST00000192012 982 ntBASIC13.3□□□□□ -0.28
P04213 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.3□□□□□ -0.28
P04213 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
P04213 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04213 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04213 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P04213 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P04213 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
P04213 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04213 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P04213 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04213 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04213 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
P04213 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04213 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.29□□□□□ -0.28
P04213 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.29□□□□□ -0.28
P04213 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.29□□□□□ -0.28
P04213 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.29□□□□□ -0.28
P04213 Gm26308-201ENSMUST00000157768 69 ntBASIC13.29□□□□□ -0.28
P04213 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
P04213 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.29□□□□□ -0.28
P04213 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.29□□□□□ -0.28
P04213 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.29□□□□□ -0.28
P04213 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.29□□□□□ -0.28
P04213 Gm46209-201ENSMUST00000217912 553 ntBASIC13.29□□□□□ -0.28
P04213 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.29□□□□□ -0.28
P04213 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.29□□□□□ -0.28
P04213 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
P04213 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
P04213 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
P04213 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04213 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.28□□□□□ -0.28
P04213 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
P04213 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.28□□□□□ -0.28
P04213 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
P04213 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Gm14701-201ENSMUST00000117156 348 ntBASIC13.28□□□□□ -0.28
P04213 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.28□□□□□ -0.28
P04213 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.28□□□□□ -0.28
P04213 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.28□□□□□ -0.28
P04213 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04213 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms