Protein–RNA interactions for Protein: P01727

Ig lambda-1 chain V region S43, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01727 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01727 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01727 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01727 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.08□□□□□ -0.64
P01727 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01727 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01727 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.08□□□□□ -0.64
P01727 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01727 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01727 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01727 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01727 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01727 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01727 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01727 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01727 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
P01727 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
P01727 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
P01727 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
P01727 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.07□□□□□ -0.64
P01727 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Carlr-201ENSMUST00000181515 2574 ntBASIC11.07□□□□□ -0.64
P01727 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
P01727 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Gm13829-201ENSMUST00000119600 138 ntBASIC11.07□□□□□ -0.64
P01727 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.07□□□□□ -0.64
P01727 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.07□□□□□ -0.64
P01727 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.07□□□□□ -0.64
P01727 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.07□□□□□ -0.64
P01727 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.07□□□□□ -0.64
P01727 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
P01727 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.07□□□□□ -0.64
P01727 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
P01727 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.07□□□□□ -0.64
P01727 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
P01727 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
P01727 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
P01727 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
P01727 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.07□□□□□ -0.64
P01727 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01727 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P01727 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.06□□□□□ -0.64
P01727 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P01727 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01727 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01727 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01727 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01727 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01727 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
P01727 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01727 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01727 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.06□□□□□ -0.64
P01727 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01727 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01727 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.06□□□□□ -0.64
P01727 Gm13385-201ENSMUST00000121089 220 ntBASIC11.06□□□□□ -0.64
P01727 Gm12134-201ENSMUST00000122109 520 ntBASIC11.06□□□□□ -0.64
P01727 Mir1894-201ENSMUST00000122802 81 ntBASIC11.06□□□□□ -0.64
P01727 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.06□□□□□ -0.64
P01727 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
P01727 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01727 Gm17150-201ENSMUST00000165577 381 ntBASIC11.06□□□□□ -0.64
P01727 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P01727 Gm27892-201ENSMUST00000185017 106 ntBASIC11.06□□□□□ -0.64
P01727 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P01727 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
P01727 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
P01727 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.06□□□□□ -0.64
P01727 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01727 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
P01727 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01727 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.06□□□□□ -0.64
P01727 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P01727 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.06□□□□□ -0.64
P01727 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01727 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01727 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms