Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.94□□□□□ -0.02
Vti1aO89116 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1aO89116 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1aO89116 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.94□□□□□ -0.02
Vti1aO89116 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1aO89116 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.94□□□□□ -0.02
Vti1aO89116 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1aO89116 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.94□□□□□ -0.02
Vti1aO89116 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1aO89116 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1aO89116 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1aO89116 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1aO89116 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1aO89116 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1aO89116 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1aO89116 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Vti1aO89116 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
Vti1aO89116 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1aO89116 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1aO89116 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Vti1aO89116 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1aO89116 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1aO89116 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1aO89116 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
Vti1aO89116 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1aO89116 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1aO89116 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1aO89116 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1aO89116 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1aO89116 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1aO89116 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1aO89116 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.93□□□□□ -0.02
Vti1aO89116 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1aO89116 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1aO89116 Gm12882-201ENSMUST00000121696 517 ntBASIC14.93□□□□□ -0.02
Vti1aO89116 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1aO89116 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.93□□□□□ -0.02
Vti1aO89116 Gm4804-201ENSMUST00000182234 999 ntBASIC14.93□□□□□ -0.02
Vti1aO89116 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.93□□□□□ -0.02
Vti1aO89116 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.93□□□□□ -0.02
Vti1aO89116 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.93□□□□□ -0.02
Vti1aO89116 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.93□□□□□ -0.02
Vti1aO89116 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1aO89116 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1aO89116 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1aO89116 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1aO89116 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1aO89116 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1aO89116 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.92□□□□□ -0.02
Vti1aO89116 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
Vti1aO89116 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.92□□□□□ -0.02
Vti1aO89116 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Vti1aO89116 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Vti1aO89116 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Gm28911-201ENSMUST00000188837 117 ntBASIC14.92□□□□□ -0.02
Vti1aO89116 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Vti1aO89116 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.92□□□□□ -0.02
Vti1aO89116 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.92□□□□□ -0.02
Vti1aO89116 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Vti1aO89116 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Vti1aO89116 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1aO89116 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Vti1aO89116 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1aO89116 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1aO89116 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.91□□□□□ -0.02
Vti1aO89116 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Vti1aO89116 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Vti1aO89116 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1aO89116 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1aO89116 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1aO89116 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1aO89116 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1aO89116 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Vti1aO89116 Gm4984-201ENSMUST00000115987 360 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms