Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.36□□□□□ -0.43
CcnkO88874 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CcnkO88874 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
CcnkO88874 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcnkO88874 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CcnkO88874 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.35□□□□□ -0.43
CcnkO88874 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CcnkO88874 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
CcnkO88874 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CcnkO88874 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
CcnkO88874 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.35□□□□□ -0.43
CcnkO88874 Gm12260-201ENSMUST00000122447 411 ntBASIC12.35□□□□□ -0.43
CcnkO88874 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.35□□□□□ -0.43
CcnkO88874 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.35□□□□□ -0.43
CcnkO88874 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CcnkO88874 Mir3113-201ENSMUST00000175478 76 ntBASIC12.35□□□□□ -0.43
CcnkO88874 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.35□□□□□ -0.43
CcnkO88874 Olfr286-202ENSMUST00000205305 969 ntBASIC12.35□□□□□ -0.43
CcnkO88874 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.35□□□□□ -0.43
CcnkO88874 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.35□□□□□ -0.43
CcnkO88874 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
CcnkO88874 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcnkO88874 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CcnkO88874 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcnkO88874 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcnkO88874 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CcnkO88874 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcnkO88874 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CcnkO88874 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.34□□□□□ -0.43
CcnkO88874 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcnkO88874 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcnkO88874 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.34□□□□□ -0.43
CcnkO88874 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CcnkO88874 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcnkO88874 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CcnkO88874 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.34□□□□□ -0.43
CcnkO88874 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcnkO88874 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CcnkO88874 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.34□□□□□ -0.43
CcnkO88874 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CcnkO88874 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CcnkO88874 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CcnkO88874 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
CcnkO88874 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcnkO88874 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
CcnkO88874 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CcnkO88874 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.34□□□□□ -0.43
CcnkO88874 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.34□□□□□ -0.43
CcnkO88874 Gm9182-201ENSMUST00000217829 639 ntBASIC12.34□□□□□ -0.43
CcnkO88874 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CcnkO88874 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms