Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.8□□□□□ -0.36
Cops4O88544 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cops4O88544 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Cops4O88544 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cops4O88544 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cops4O88544 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cops4O88544 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cops4O88544 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cops4O88544 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cops4O88544 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cops4O88544 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cops4O88544 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cops4O88544 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cops4O88544 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cops4O88544 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cops4O88544 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.79□□□□□ -0.36
Cops4O88544 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cops4O88544 Gm16198-201ENSMUST00000118766 670 ntBASIC12.79□□□□□ -0.36
Cops4O88544 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cops4O88544 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.79□□□□□ -0.36
Cops4O88544 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cops4O88544 Gm16026-204ENSMUST00000162652 683 ntBASIC12.79□□□□□ -0.36
Cops4O88544 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cops4O88544 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cops4O88544 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cops4O88544 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cops4O88544 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cops4O88544 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cops4O88544 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cops4O88544 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cops4O88544 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.79□□□□□ -0.36
Cops4O88544 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cops4O88544 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cops4O88544 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cops4O88544 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cops4O88544 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cops4O88544 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cops4O88544 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.78□□□□□ -0.36
Cops4O88544 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cops4O88544 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Cops4O88544 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.78□□□□□ -0.36
Cops4O88544 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cops4O88544 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cops4O88544 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cops4O88544 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cops4O88544 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cops4O88544 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cops4O88544 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cops4O88544 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cops4O88544 Gm10275-202ENSMUST00000168697 495 ntBASIC12.78□□□□□ -0.36
Cops4O88544 Gm5177-201ENSMUST00000183092 997 ntBASIC12.78□□□□□ -0.36
Cops4O88544 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cops4O88544 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.78□□□□□ -0.36
Cops4O88544 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.78□□□□□ -0.36
Cops4O88544 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cops4O88544 Gm10275-201ENSMUST00000092620 635 ntBASIC12.78□□□□□ -0.36
Cops4O88544 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cops4O88544 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cops4O88544 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cops4O88544 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cops4O88544 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cops4O88544 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cops4O88544 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.78□□□□□ -0.36
Cops4O88544 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cops4O88544 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cops4O88544 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cops4O88544 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cops4O88544 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cops4O88544 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cops4O88544 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Cops4O88544 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cops4O88544 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cops4O88544 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cops4O88544 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cops4O88544 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Cops4O88544 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.77□□□□□ -0.36
Cops4O88544 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cops4O88544 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cops4O88544 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cops4O88544 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.77□□□□□ -0.37
Cops4O88544 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.77□□□□□ -0.37
Cops4O88544 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.77□□□□□ -0.37
Cops4O88544 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cops4O88544 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cops4O88544 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cops4O88544 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cops4O88544 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cops4O88544 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.77□□□□□ -0.37
Cops4O88544 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.77□□□□□ -0.37
Cops4O88544 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms