Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nid2O88322 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Nid2O88322 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
Nid2O88322 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nid2O88322 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
Nid2O88322 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC17.77■□□□□ 0.44
Nid2O88322 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC17.77■□□□□ 0.44
Nid2O88322 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nid2O88322 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nid2O88322 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nid2O88322 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nid2O88322 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nid2O88322 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nid2O88322 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
Nid2O88322 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC17.77■□□□□ 0.44
Nid2O88322 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nid2O88322 Gm24548-201ENSMUST00000158650 108 ntBASIC17.77■□□□□ 0.44
Nid2O88322 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nid2O88322 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC17.77■□□□□ 0.44
Nid2O88322 Gm5781-201ENSMUST00000219792 443 ntBASIC17.77■□□□□ 0.44
Nid2O88322 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC17.77■□□□□ 0.44
Nid2O88322 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nid2O88322 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nid2O88322 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
Nid2O88322 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Nid2O88322 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Nid2O88322 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nid2O88322 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nid2O88322 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nid2O88322 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nid2O88322 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nid2O88322 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nid2O88322 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nid2O88322 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nid2O88322 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nid2O88322 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Nid2O88322 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nid2O88322 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nid2O88322 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Nid2O88322 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC17.76■□□□□ 0.43
Nid2O88322 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC17.76■□□□□ 0.43
Nid2O88322 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC17.76■□□□□ 0.43
Nid2O88322 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC17.76■□□□□ 0.43
Nid2O88322 Gm4819-201ENSMUST00000182170 1009 ntBASIC17.76■□□□□ 0.43
Nid2O88322 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nid2O88322 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nid2O88322 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC17.76■□□□□ 0.43
Nid2O88322 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC17.76■□□□□ 0.43
Nid2O88322 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Nid2O88322 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC17.76■□□□□ 0.43
Nid2O88322 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Nid2O88322 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nid2O88322 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Nid2O88322 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nid2O88322 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nid2O88322 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nid2O88322 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nid2O88322 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nid2O88322 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nid2O88322 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nid2O88322 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nid2O88322 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nid2O88322 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nid2O88322 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC17.75■□□□□ 0.43
Nid2O88322 Morn2-202ENSMUST00000227729 656 ntBASIC17.75■□□□□ 0.43
Nid2O88322 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nid2O88322 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.75■□□□□ 0.43
Nid2O88322 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nid2O88322 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nid2O88322 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.75■□□□□ 0.43
Nid2O88322 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nid2O88322 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nid2O88322 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC17.75■□□□□ 0.43
Nid2O88322 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.75■□□□□ 0.43
Nid2O88322 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nid2O88322 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nid2O88322 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.74■□□□□ 0.43
Nid2O88322 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nid2O88322 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nid2O88322 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nid2O88322 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC17.74■□□□□ 0.43
Nid2O88322 Gm6447-201ENSMUST00000118905 835 ntBASIC17.74■□□□□ 0.43
Nid2O88322 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nid2O88322 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Nid2O88322 Gm5896-201ENSMUST00000189662 1024 ntBASIC17.74■□□□□ 0.43
Nid2O88322 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC17.74■□□□□ 0.43
Nid2O88322 CT030182.1-201ENSMUST00000225935 533 ntBASIC17.74■□□□□ 0.43
Nid2O88322 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nid2O88322 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Nid2O88322 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nid2O88322 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nid2O88322 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nid2O88322 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nid2O88322 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nid2O88322 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nid2O88322 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Nid2O88322 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nid2O88322 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nid2O88322 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nid2O88322 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms