Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Rnf13O54965 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
Rnf13O54965 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rnf13O54965 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rnf13O54965 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.56□□□□□ -0.4
Rnf13O54965 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Rnf13O54965 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.56□□□□□ -0.4
Rnf13O54965 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf13O54965 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rnf13O54965 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Rnf13O54965 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rnf13O54965 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.55□□□□□ -0.4
Rnf13O54965 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Rnf13O54965 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rnf13O54965 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rnf13O54965 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rnf13O54965 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Rnf13O54965 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.55□□□□□ -0.4
Rnf13O54965 Gm12260-201ENSMUST00000122447 411 ntBASIC12.55□□□□□ -0.4
Rnf13O54965 Gm17271-201ENSMUST00000165535 355 ntBASIC12.55□□□□□ -0.4
Rnf13O54965 Gm2445-201ENSMUST00000182798 989 ntBASIC12.55□□□□□ -0.4
Rnf13O54965 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.55□□□□□ -0.4
Rnf13O54965 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.55□□□□□ -0.4
Rnf13O54965 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Rnf13O54965 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rnf13O54965 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rnf13O54965 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf13O54965 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.55□□□□□ -0.4
Rnf13O54965 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Rnf13O54965 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rnf13O54965 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rnf13O54965 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rnf13O54965 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rnf13O54965 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Rnf13O54965 Gm1401-201ENSMUST00000122048 772 ntBASIC12.54□□□□□ -0.4
Rnf13O54965 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Rnf13O54965 Gm25925-201ENSMUST00000158314 306 ntBASIC12.54□□□□□ -0.4
Rnf13O54965 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.54□□□□□ -0.4
Rnf13O54965 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.54□□□□□ -0.4
Rnf13O54965 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.54□□□□□ -0.4
Rnf13O54965 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.54□□□□□ -0.4
Rnf13O54965 Gm18041-201ENSMUST00000218210 618 ntBASIC12.54□□□□□ -0.4
Rnf13O54965 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.54□□□□□ -0.4
Rnf13O54965 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.54□□□□□ -0.4
Rnf13O54965 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms