Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Banf1O54962 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.1□□□□□ -0.15
Banf1O54962 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Banf1O54962 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Banf1O54962 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Banf1O54962 AA543401-201ENSMUST00000164248 1269 ntBASIC14.1□□□□□ -0.15
Banf1O54962 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.1□□□□□ -0.15
Banf1O54962 Gm27494-201ENSMUST00000184735 189 ntBASIC14.1□□□□□ -0.15
Banf1O54962 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Banf1O54962 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Banf1O54962 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Banf1O54962 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Banf1O54962 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.1□□□□□ -0.15
Banf1O54962 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Banf1O54962 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Banf1O54962 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Banf1O54962 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Banf1O54962 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Banf1O54962 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Banf1O54962 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Banf1O54962 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.09□□□□□ -0.15
Banf1O54962 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Banf1O54962 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Banf1O54962 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Banf1O54962 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Banf1O54962 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Banf1O54962 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Banf1O54962 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Banf1O54962 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Banf1O54962 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.09□□□□□ -0.15
Banf1O54962 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Banf1O54962 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Banf1O54962 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Banf1O54962 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Banf1O54962 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Banf1O54962 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.09□□□□□ -0.15
Banf1O54962 Gm18766-201ENSMUST00000189811 808 ntBASIC14.09□□□□□ -0.15
Banf1O54962 AA619741-201ENSMUST00000195095 646 ntBASIC14.09□□□□□ -0.15
Banf1O54962 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.09□□□□□ -0.15
Banf1O54962 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.09□□□□□ -0.15
Banf1O54962 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Banf1O54962 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.09□□□□□ -0.15
Banf1O54962 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Banf1O54962 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Banf1O54962 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Banf1O54962 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Banf1O54962 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Banf1O54962 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.09□□□□□ -0.15
Banf1O54962 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Banf1O54962 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Banf1O54962 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Banf1O54962 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Banf1O54962 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.09□□□□□ -0.15
Banf1O54962 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.09□□□□□ -0.15
Banf1O54962 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Banf1O54962 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
Banf1O54962 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Banf1O54962 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Banf1O54962 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Banf1O54962 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Banf1O54962 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.08□□□□□ -0.16
Banf1O54962 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.08□□□□□ -0.16
Banf1O54962 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.08□□□□□ -0.16
Banf1O54962 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.08□□□□□ -0.16
Banf1O54962 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 Gm8000-201ENSMUST00000188378 592 ntBASIC14.08□□□□□ -0.16
Banf1O54962 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 Gm18049-201ENSMUST00000208909 581 ntBASIC14.08□□□□□ -0.16
Banf1O54962 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Banf1O54962 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.08□□□□□ -0.16
Banf1O54962 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Banf1O54962 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Banf1O54962 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Banf1O54962 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Banf1O54962 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms