Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Cldn5O54942 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn5O54942 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Cldn5O54942 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn5O54942 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn5O54942 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn5O54942 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn5O54942 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn5O54942 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn5O54942 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn5O54942 Gm11524-201ENSMUST00000119349 807 ntBASIC14.36□□□□□ -0.11
Cldn5O54942 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.36□□□□□ -0.11
Cldn5O54942 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn5O54942 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.36□□□□□ -0.11
Cldn5O54942 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.36□□□□□ -0.11
Cldn5O54942 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.36□□□□□ -0.11
Cldn5O54942 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.36□□□□□ -0.11
Cldn5O54942 Gm44719-201ENSMUST00000206404 149 ntBASIC14.36□□□□□ -0.11
Cldn5O54942 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.36□□□□□ -0.11
Cldn5O54942 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn5O54942 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn5O54942 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn5O54942 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn5O54942 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn5O54942 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.36□□□□□ -0.11
Cldn5O54942 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.36□□□□□ -0.11
Cldn5O54942 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn5O54942 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn5O54942 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn5O54942 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Cldn5O54942 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn5O54942 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn5O54942 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.36□□□□□ -0.11
Cldn5O54942 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn5O54942 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cldn5O54942 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cldn5O54942 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.35□□□□□ -0.11
Cldn5O54942 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn5O54942 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn5O54942 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.35□□□□□ -0.11
Cldn5O54942 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Cldn5O54942 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn5O54942 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Cldn5O54942 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn5O54942 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cldn5O54942 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn5O54942 Gm26464-201ENSMUST00000157094 305 ntBASIC14.35□□□□□ -0.11
Cldn5O54942 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cldn5O54942 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Cldn5O54942 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn5O54942 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn5O54942 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn5O54942 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn5O54942 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn5O54942 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn5O54942 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn5O54942 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn5O54942 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cldn5O54942 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn5O54942 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn5O54942 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Cldn5O54942 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn5O54942 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn5O54942 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn5O54942 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn5O54942 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn5O54942 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.34□□□□□ -0.11
Cldn5O54942 Gm28911-201ENSMUST00000188837 117 ntBASIC14.34□□□□□ -0.11
Cldn5O54942 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.34□□□□□ -0.11
Cldn5O54942 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn5O54942 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.34□□□□□ -0.11
Cldn5O54942 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.34□□□□□ -0.11
Cldn5O54942 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn5O54942 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.34□□□□□ -0.11
Cldn5O54942 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn5O54942 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cldn5O54942 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn5O54942 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn5O54942 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.34□□□□□ -0.11
Cldn5O54942 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Cldn5O54942 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn5O54942 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn5O54942 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cldn5O54942 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn5O54942 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn5O54942 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
Cldn5O54942 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn5O54942 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn5O54942 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Cldn5O54942 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Cldn5O54942 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cldn5O54942 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.33□□□□□ -0.12
Cldn5O54942 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.33□□□□□ -0.12
Cldn5O54942 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn5O54942 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms