Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Dkk1O54908 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Dkk1O54908 Gm3532-201ENSMUST00000181880 1396 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Dkk1O54908 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Dkk1O54908 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC12.66□□□□□ -0.38
Dkk1O54908 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Dkk1O54908 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Dkk1O54908 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Dkk1O54908 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Dkk1O54908 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Dkk1O54908 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Dkk1O54908 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.65□□□□□ -0.38
Dkk1O54908 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dkk1O54908 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.65□□□□□ -0.38
Dkk1O54908 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dkk1O54908 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dkk1O54908 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dkk1O54908 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dkk1O54908 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Dkk1O54908 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dkk1O54908 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.65□□□□□ -0.38
Dkk1O54908 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Dkk1O54908 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Dkk1O54908 Gimap4-203ENSMUST00000118802 771 ntTSL 3 BASIC12.65□□□□□ -0.38
Dkk1O54908 Gm15443-201ENSMUST00000118947 820 ntBASIC12.65□□□□□ -0.38
Dkk1O54908 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.65□□□□□ -0.38
Dkk1O54908 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.65□□□□□ -0.38
Dkk1O54908 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.65□□□□□ -0.38
Dkk1O54908 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Dkk1O54908 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Dkk1O54908 Gm18396-201ENSMUST00000177095 361 ntBASIC12.65□□□□□ -0.38
Dkk1O54908 Gm26968-201ENSMUST00000182894 481 ntBASIC12.65□□□□□ -0.38
Dkk1O54908 Gm27494-201ENSMUST00000184735 189 ntBASIC12.65□□□□□ -0.38
Dkk1O54908 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC12.65□□□□□ -0.38
Dkk1O54908 Gm8920-201ENSMUST00000196153 924 ntBASIC12.65□□□□□ -0.38
Dkk1O54908 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC12.65□□□□□ -0.38
Dkk1O54908 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC12.65□□□□□ -0.38
Dkk1O54908 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC12.65□□□□□ -0.38
Dkk1O54908 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Dkk1O54908 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dkk1O54908 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dkk1O54908 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Dkk1O54908 Olfr452-201ENSMUST00000075468 954 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Dkk1O54908 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Dkk1O54908 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Dkk1O54908 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dkk1O54908 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC12.65□□□□□ -0.38
Dkk1O54908 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.65□□□□□ -0.38
Dkk1O54908 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dkk1O54908 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dkk1O54908 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dkk1O54908 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Dkk1O54908 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dkk1O54908 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Dkk1O54908 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Dkk1O54908 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.65□□□□□ -0.38
Dkk1O54908 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
Dkk1O54908 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Dkk1O54908 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Dkk1O54908 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Dkk1O54908 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Dkk1O54908 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Dkk1O54908 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
Dkk1O54908 Pfn4-201ENSMUST00000020967 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Dkk1O54908 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Dkk1O54908 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Gm7961-201ENSMUST00000201338 1436 ntBASIC12.64□□□□□ -0.39
Dkk1O54908 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Dkk1O54908 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.64□□□□□ -0.39
Dkk1O54908 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.64□□□□□ -0.39
Dkk1O54908 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Dkk1O54908 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Dkk1O54908 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Gm14898-201ENSMUST00000120202 645 ntBASIC12.64□□□□□ -0.39
Dkk1O54908 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC12.64□□□□□ -0.39
Dkk1O54908 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Gm24513-201ENSMUST00000174964 138 ntBASIC12.64□□□□□ -0.39
Dkk1O54908 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC12.64□□□□□ -0.39
Dkk1O54908 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC12.64□□□□□ -0.39
Dkk1O54908 Gm37935-201ENSMUST00000192012 982 ntBASIC12.64□□□□□ -0.39
Dkk1O54908 Gm2756-201ENSMUST00000195851 400 ntBASIC12.64□□□□□ -0.39
Dkk1O54908 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.64□□□□□ -0.39
Dkk1O54908 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC12.64□□□□□ -0.39
Dkk1O54908 Olfr286-202ENSMUST00000205305 969 ntBASIC12.64□□□□□ -0.39
Dkk1O54908 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.64□□□□□ -0.39
Dkk1O54908 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms