Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.26□□□□□ -0.13
Sdc4O35988 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.26□□□□□ -0.13
Sdc4O35988 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc4O35988 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc4O35988 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc4O35988 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc4O35988 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc4O35988 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Sdc4O35988 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.26□□□□□ -0.13
Sdc4O35988 Gm9002-201ENSMUST00000178437 499 ntBASIC14.26□□□□□ -0.13
Sdc4O35988 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc4O35988 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
Sdc4O35988 Gm43094-201ENSMUST00000196549 921 ntBASIC14.26□□□□□ -0.13
Sdc4O35988 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.26□□□□□ -0.13
Sdc4O35988 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.26□□□□□ -0.13
Sdc4O35988 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.26□□□□□ -0.13
Sdc4O35988 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc4O35988 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc4O35988 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Sdc4O35988 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc4O35988 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc4O35988 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sdc4O35988 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc4O35988 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc4O35988 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc4O35988 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sdc4O35988 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.25□□□□□ -0.13
Sdc4O35988 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.25□□□□□ -0.13
Sdc4O35988 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.25□□□□□ -0.13
Sdc4O35988 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.25□□□□□ -0.13
Sdc4O35988 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.25□□□□□ -0.13
Sdc4O35988 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.25□□□□□ -0.13
Sdc4O35988 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Sdc4O35988 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sdc4O35988 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.24□□□□□ -0.13
Sdc4O35988 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Sdc4O35988 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sdc4O35988 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Sdc4O35988 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Sdc4O35988 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sdc4O35988 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Sdc4O35988 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.24□□□□□ -0.13
Sdc4O35988 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.24□□□□□ -0.13
Sdc4O35988 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Sdc4O35988 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.24□□□□□ -0.13
Sdc4O35988 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.24□□□□□ -0.13
Sdc4O35988 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.24□□□□□ -0.13
Sdc4O35988 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Sdc4O35988 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.24□□□□□ -0.13
Sdc4O35988 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms