Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Gm24420-201ENSMUST00000176676 59 ntBASIC15.28■□□□□ 0.04
Sptlc1O35704 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sptlc1O35704 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.28■□□□□ 0.04
Sptlc1O35704 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.28■□□□□ 0.04
Sptlc1O35704 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC15.28■□□□□ 0.04
Sptlc1O35704 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sptlc1O35704 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sptlc1O35704 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sptlc1O35704 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sptlc1O35704 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sptlc1O35704 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sptlc1O35704 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sptlc1O35704 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.28■□□□□ 0.04
Sptlc1O35704 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sptlc1O35704 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sptlc1O35704 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sptlc1O35704 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sptlc1O35704 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.28■□□□□ 0.04
Sptlc1O35704 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.28■□□□□ 0.04
Sptlc1O35704 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sptlc1O35704 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sptlc1O35704 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sptlc1O35704 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sptlc1O35704 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sptlc1O35704 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sptlc1O35704 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sptlc1O35704 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sptlc1O35704 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sptlc1O35704 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sptlc1O35704 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sptlc1O35704 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.27■□□□□ 0.04
Sptlc1O35704 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sptlc1O35704 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.27■□□□□ 0.04
Sptlc1O35704 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.27■□□□□ 0.04
Sptlc1O35704 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sptlc1O35704 Gm4984-201ENSMUST00000115987 360 ntBASIC15.27■□□□□ 0.04
Sptlc1O35704 Mir1894-201ENSMUST00000122802 81 ntBASIC15.27■□□□□ 0.04
Sptlc1O35704 Gm15429-201ENSMUST00000151268 798 ntBASIC15.27■□□□□ 0.04
Sptlc1O35704 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sptlc1O35704 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.27■□□□□ 0.04
Sptlc1O35704 AC129323.1-201ENSMUST00000216733 470 ntBASIC15.27■□□□□ 0.04
Sptlc1O35704 AC159205.7-201ENSMUST00000225988 692 ntBASIC15.27■□□□□ 0.04
Sptlc1O35704 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sptlc1O35704 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sptlc1O35704 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sptlc1O35704 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Sptlc1O35704 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sptlc1O35704 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.27■□□□□ 0.03
Sptlc1O35704 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sptlc1O35704 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sptlc1O35704 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sptlc1O35704 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.27■□□□□ 0.03
Sptlc1O35704 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sptlc1O35704 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sptlc1O35704 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptlc1O35704 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptlc1O35704 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptlc1O35704 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Sptlc1O35704 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptlc1O35704 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sptlc1O35704 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptlc1O35704 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptlc1O35704 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Sptlc1O35704 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sptlc1O35704 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptlc1O35704 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptlc1O35704 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sptlc1O35704 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sptlc1O35704 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptlc1O35704 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Sptlc1O35704 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Sptlc1O35704 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sptlc1O35704 Gm12390-201ENSMUST00000117897 397 ntBASIC15.26■□□□□ 0.03
Sptlc1O35704 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptlc1O35704 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sptlc1O35704 Gm27839-201ENSMUST00000184242 106 ntBASIC15.26■□□□□ 0.03
Sptlc1O35704 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC15.26■□□□□ 0.03
Sptlc1O35704 Gm37533-201ENSMUST00000193848 545 ntBASIC15.26■□□□□ 0.03
Sptlc1O35704 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.26■□□□□ 0.03
Sptlc1O35704 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.26■□□□□ 0.03
Sptlc1O35704 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC15.26■□□□□ 0.03
Sptlc1O35704 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.26■□□□□ 0.03
Sptlc1O35704 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sptlc1O35704 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptlc1O35704 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sptlc1O35704 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptlc1O35704 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptlc1O35704 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptlc1O35704 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptlc1O35704 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sptlc1O35704 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sptlc1O35704 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.25■□□□□ 0.03
Sptlc1O35704 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sptlc1O35704 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Sptlc1O35704 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Sptlc1O35704 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sptlc1O35704 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sptlc1O35704 Gm42941-201ENSMUST00000200347 1321 ntBASIC15.25■□□□□ 0.03
Sptlc1O35704 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sptlc1O35704 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms