Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Pcf11G3X9Z4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Pcf11G3X9Z4 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Pcf11G3X9Z4 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC20.64■□□□□ 0.9
Pcf11G3X9Z4 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcf11G3X9Z4 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcf11G3X9Z4 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcf11G3X9Z4 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcf11G3X9Z4 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Pcf11G3X9Z4 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Pcf11G3X9Z4 Gm17383-201ENSMUST00000078739 1041 ntBASIC20.64■□□□□ 0.9
Pcf11G3X9Z4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
Pcf11G3X9Z4 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcf11G3X9Z4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Pcf11G3X9Z4 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcf11G3X9Z4 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Pcf11G3X9Z4 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Pcf11G3X9Z4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Pcf11G3X9Z4 Tmed9-203ENSMUST00000224741 1450 ntBASIC20.64■□□□□ 0.89
Pcf11G3X9Z4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcf11G3X9Z4 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Gm13786-201ENSMUST00000122371 333 ntBASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Gm32025-201ENSMUST00000217960 307 ntBASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 AC022775.2-201ENSMUST00000227885 646 ntBASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 AC153366.2-201ENSMUST00000219461 1984 ntBASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Gm3756-201ENSMUST00000169182 1355 ntBASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Gm8793-201ENSMUST00000183069 1303 ntBASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Snord83b-201ENSMUST00000104546 94 ntBASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcf11G3X9Z4 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Pcf11G3X9Z4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcf11G3X9Z4 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcf11G3X9Z4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pcf11G3X9Z4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcf11G3X9Z4 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcf11G3X9Z4 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcf11G3X9Z4 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Pcf11G3X9Z4 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcf11G3X9Z4 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcf11G3X9Z4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcf11G3X9Z4 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcf11G3X9Z4 Gm11591-201ENSMUST00000120063 702 ntBASIC20.62■□□□□ 0.89
Pcf11G3X9Z4 Gm12329-201ENSMUST00000120829 1007 ntBASIC20.62■□□□□ 0.89
Pcf11G3X9Z4 Gm25261-201ENSMUST00000157416 134 ntBASIC20.62■□□□□ 0.89
Pcf11G3X9Z4 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcf11G3X9Z4 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcf11G3X9Z4 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcf11G3X9Z4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcf11G3X9Z4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Gm11637-201ENSMUST00000120601 592 ntBASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Gm6334-201ENSMUST00000207083 228 ntBASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Gm38049-201ENSMUST00000195698 1372 ntBASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcf11G3X9Z4 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcf11G3X9Z4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcf11G3X9Z4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Pcf11G3X9Z4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcf11G3X9Z4 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcf11G3X9Z4 Gm18244-201ENSMUST00000219747 1566 ntBASIC20.6■□□□□ 0.89
Pcf11G3X9Z4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms