Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm29310-201ENSMUST00000185468 696 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm21825-201ENSMUST00000185728 696 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm29109-201ENSMUST00000185895 696 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm21896-201ENSMUST00000186520 696 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm21873-201ENSMUST00000186728 696 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm21794-201ENSMUST00000187056 696 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm21880-201ENSMUST00000187275 696 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm21826-201ENSMUST00000187451 696 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm21198-201ENSMUST00000188393 696 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm21749-201ENSMUST00000189343 696 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm21901-201ENSMUST00000189568 696 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm29424-201ENSMUST00000189716 696 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm28599-201ENSMUST00000189838 694 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm21867-201ENSMUST00000189917 696 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm29269-201ENSMUST00000190087 696 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm21722-201ENSMUST00000190153 696 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm28423-201ENSMUST00000190701 696 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm21899-201ENSMUST00000190745 696 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm21910-201ENSMUST00000191163 696 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm21849-201ENSMUST00000191571 696 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm28678-201ENSMUST00000191593 696 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm20910-201ENSMUST00000193268 696 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm21871-201ENSMUST00000194621 696 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Gm44492-201ENSMUST00000197012 141 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Pcdh1F7BJK1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pcdh1F7BJK1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh1F7BJK1 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms