Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Gm7600-201ENSMUST00000209657 785 ntBASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Spcs1-203ENSMUST00000226374 592 ntBASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc188F6WEU2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc188F6WEU2 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc188F6WEU2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc188F6WEU2 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc188F6WEU2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.83□□□□□ -0.19
Ccdc188F6WEU2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Ccdc188F6WEU2 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Gm27552-201ENSMUST00000183351 62 ntBASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Gm27844-201ENSMUST00000183613 62 ntBASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.83□□□□□ -0.2
Ccdc188F6WEU2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms