Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Gm45384-201ENSMUST00000210451 277 ntBASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb9E9Q5G2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Gm11424-201ENSMUST00000121929 829 ntBASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Gm7653-201ENSMUST00000214567 508 ntBASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Gm5161-201ENSMUST00000075243 853 ntBASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb9E9Q5G2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhb9E9Q5G2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb9E9Q5G2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms