Protein–RNA interactions for Protein: D3Z3U4

9630041A04Rik, RIKEN cDNA 9630041A04 gene, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9630041A04RikD3Z3U4 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
9630041A04RikD3Z3U4 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
9630041A04RikD3Z3U4 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
9630041A04RikD3Z3U4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
9630041A04RikD3Z3U4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
9630041A04RikD3Z3U4 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
9630041A04RikD3Z3U4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
9630041A04RikD3Z3U4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
9630041A04RikD3Z3U4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
9630041A04RikD3Z3U4 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.71□□□□□ -0.21
9630041A04RikD3Z3U4 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
9630041A04RikD3Z3U4 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
9630041A04RikD3Z3U4 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
9630041A04RikD3Z3U4 Gm38241-201ENSMUST00000192641 898 ntBASIC13.71□□□□□ -0.21
9630041A04RikD3Z3U4 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
9630041A04RikD3Z3U4 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
9630041A04RikD3Z3U4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
9630041A04RikD3Z3U4 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
9630041A04RikD3Z3U4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
9630041A04RikD3Z3U4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
9630041A04RikD3Z3U4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
9630041A04RikD3Z3U4 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
9630041A04RikD3Z3U4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
9630041A04RikD3Z3U4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
9630041A04RikD3Z3U4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
9630041A04RikD3Z3U4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
9630041A04RikD3Z3U4 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
9630041A04RikD3Z3U4 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.22
9630041A04RikD3Z3U4 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Gm42627-201ENSMUST00000197347 224 ntBASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Gm45880-201ENSMUST00000213041 853 ntBASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
9630041A04RikD3Z3U4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 Gm13612-201ENSMUST00000119276 390 ntBASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 Gm13350-201ENSMUST00000120519 479 ntBASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 Gm19184-201ENSMUST00000196798 928 ntBASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 Gm6983-201ENSMUST00000214912 628 ntBASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
9630041A04RikD3Z3U4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms