Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.42□□□□□ -0.42
Shank1D3YZU1 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Gm27501-201ENSMUST00000183599 107 ntBASIC12.42□□□□□ -0.42
Shank1D3YZU1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.42□□□□□ -0.42
Shank1D3YZU1 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.42□□□□□ -0.42
Shank1D3YZU1 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Carlr-201ENSMUST00000181515 2574 ntBASIC12.41□□□□□ -0.42
Shank1D3YZU1 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.41□□□□□ -0.42
Shank1D3YZU1 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Proscos-202ENSMUST00000178990 666 ntBASIC12.41□□□□□ -0.42
Shank1D3YZU1 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.41□□□□□ -0.42
Shank1D3YZU1 Gm4857-201ENSMUST00000192718 785 ntBASIC12.41□□□□□ -0.42
Shank1D3YZU1 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.41□□□□□ -0.42
Shank1D3YZU1 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shank1D3YZU1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Gm27331-201ENSMUST00000183705 60 ntBASIC12.4□□□□□ -0.42
Shank1D3YZU1 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.4□□□□□ -0.42
Shank1D3YZU1 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Gm38341-201ENSMUST00000195357 515 ntBASIC12.4□□□□□ -0.42
Shank1D3YZU1 Gm7783-201ENSMUST00000204795 781 ntBASIC12.4□□□□□ -0.42
Shank1D3YZU1 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.4□□□□□ -0.42
Shank1D3YZU1 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.4□□□□□ -0.42
Shank1D3YZU1 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shank1D3YZU1 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Gm12176-201ENSMUST00000121420 875 ntBASIC12.39□□□□□ -0.43
Shank1D3YZU1 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Gm8810-201ENSMUST00000172895 754 ntBASIC12.39□□□□□ -0.43
Shank1D3YZU1 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms