Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Gm14859-201ENSMUST00000117752 357 ntBASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Gm7230-201ENSMUST00000173026 815 ntBASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Gm12887B1AVM1 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gm12887B1AVM1 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gm12887B1AVM1 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gm12887B1AVM1 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gm12887B1AVM1 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Gm12887B1AVM1 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.21□□□□□ -0.62
Gm12887B1AVM1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Gm12887B1AVM1 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC11.2□□□□□ -0.62
Gm12887B1AVM1 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Gm12887B1AVM1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.19□□□□□ -0.62
Gm12887B1AVM1 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms