Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col4a6B1AVK5 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Gm25214-201ENSMUST00000104573 129 ntBASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Col4a6B1AVK5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col4a6B1AVK5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col4a6B1AVK5 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.96□□□□□ -0.18
Col4a6B1AVK5 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col4a6B1AVK5 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col4a6B1AVK5 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col4a6B1AVK5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Gm22121-201ENSMUST00000175148 54 ntBASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Gm18584-201ENSMUST00000203098 964 ntBASIC13.95□□□□□ -0.18
Col4a6B1AVK5 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col4a6B1AVK5 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Gm30285-201ENSMUST00000214614 422 ntBASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col4a6B1AVK5 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.94□□□□□ -0.18
Col4a6B1AVK5 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Nsd1-205ENSMUST00000224693 852 ntBASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col4a6B1AVK5 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms