Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn1aA2APX8 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.42□□□□□ -0.1
Scn1aA2APX8 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Gm24196-201ENSMUST00000179161 110 ntBASIC14.42□□□□□ -0.1
Scn1aA2APX8 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Scn1aA2APX8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.42□□□□□ -0.1
Scn1aA2APX8 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.42□□□□□ -0.1
Scn1aA2APX8 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.42□□□□□ -0.1
Scn1aA2APX8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.42□□□□□ -0.1
Scn1aA2APX8 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Gm25857-201ENSMUST00000082788 129 ntBASIC14.42□□□□□ -0.1
Scn1aA2APX8 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn1aA2APX8 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.41□□□□□ -0.1
Scn1aA2APX8 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.41□□□□□ -0.1
Scn1aA2APX8 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.41□□□□□ -0.1
Scn1aA2APX8 Gm24447-201ENSMUST00000083977 338 ntBASIC14.41□□□□□ -0.1
Scn1aA2APX8 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Gm12928-201ENSMUST00000117115 573 ntBASIC14.41□□□□□ -0.1
Scn1aA2APX8 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.41□□□□□ -0.1
Scn1aA2APX8 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Gm10012-201ENSMUST00000078252 192 ntBASIC14.41□□□□□ -0.1
Scn1aA2APX8 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn1aA2APX8 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.4□□□□□ -0.1
Scn1aA2APX8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.4□□□□□ -0.1
Scn1aA2APX8 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn1aA2APX8 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms